PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734920.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 349aa MW: 37560.7 Da PI: 6.5319

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734920.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	110.4	2.6e-34	87	184	4	104
TCP 4 kkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaaksk 98 k+++ ++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai e+tgt++++a ++ s + +++ ++s+ ++ + ++k XP_022734920.1 87 PKRPSTDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIGWLLERAEPAIVEATGTGTIPAIAV---SVNGTVKIPTSSGKQDGDLPKK 178 68999**************************************************************555...2222222111222222222222 PP TCP 99 ksqksa 104 ++++++ XP_022734920.1 179 RRKRPS 184 222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MACNQNQTID ETDKSINNDN TFIIDKQQQQ EESNNTTPSF SPSEATVMDP NQPMKEEDLT 60 DTEPREFTNP TVVQVSPAAQ TERSFVPKRP STDRHTKVEG RGRRIRIPAT CAARIFQLTR 120 ELGHKSDGET IGWLLERAEP AIVEATGTGT IPAIAVSVNG TVKIPTSSGK QDGDLPKKRR 180 KRPSNSEFID VNEHQSSVSS GLAPIAPITY SSVNVNSQGL VPIWPMGTFG VFPAAANFAP 240 GSNQARLWTI PATATPFFDV AGRPISRFVS AMQPEVRGSS VGSMESSVVP SSSSGGTSVT 300 GVSGSSNGNN SSSNSTTQML REFSLEILDK RELQFLGRPA NHQTPCSKP

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MACNQNQTID ETDKSINNDN TFIIDKQQQQ EESNNTTPSF SPSEATVMDP NQPMKEEDLT  60
DTEPREFTNP TVVQVSPAAQ TERSFVPKRP STDRHTKVEG RGRRIRIPAT CAARIFQLTR  120
ELGHKSDGET IGWLLERAEP AIVEATGTGT IPAIAVSVNG TVKIPTSSGK QDGDLPKKRR  180
KRPSNSEFID VNEHQSSVSS GLAPIAPITY SSVNVNSQGL VPIWPMGTFG VFPAAANFAP  240
GSNQARLWTI PATATPFFDV AGRPISRFVS AMQPEVRGSS VGSMESSVVP SSSSGGTSVT  300
GVSGSSNGNN SSSNSTTQML REFSLEILDK RELQFLGRPA NHQTPCSKP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	176	183	PKKRRKRP
2	177	181	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	3e-77	TCP family protein