PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734496.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 405aa MW: 44659.9 Da PI: 7.4324

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	16.2	2.2e-05	2	35	3	36
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg 36 e++C+ + + +C+++ +lC +C + H+ XP_022734496.1 2 EKICEFCRTSRPVVYCKSDAAHLCLSCDAKVHSA 35 689****99****************99954 PP
2	CCT	45.3	3.1e-16	349	392	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Re+a++RYkeK+k R+ e+++r +s Ka+A+ +RvKGrF+k++ XP_022734496.1 349 RENAMMRYKEKKKARLHERQTRSASQKARADVQKRVKGRFAKSE 392 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 405 aa Download sequence
MEKICEFCRT SRPVVYCKSD AAHLCLSCDA KVHSANALSN RHLRTLLCDS CRCRPSYVRC 60 LDHRMFMCHG CDQSIHDISS QHQRRAVSSY LGCPSAKDFA ALWGFELNEM DDNPAQDLSL 120 SNSCVSMNPN AVNLENLRQS CSRIGVSSCK SSVTSLPAAG HNIGSNSQRT KVINKGQQQQ 180 NTSFILQQIL DLKKLQLTEG DSHLPFICAL EQADTTSSIC NSSKNVDSNL VQDIGTNLHQ 240 SDNPLDELNA DPLPLSFTHL ENLSSSSTSG MLLYGESFWQ CKSPIHDSQG IIGTPRPIRP 300 SYSTISFSVS RFSAESSGTD CLDSGLSPIT QGEASGISPD LDSLHSEARE NAMMRYKEKK 360 KARLHERQTR SASQKARADV QKRVKGRFAK SEDHDSDNAN VTRSY

Sequence ? help Back to Top

Protein Sequence Length: 405 aa Download sequence

MEKICEFCRT SRPVVYCKSD AAHLCLSCDA KVHSANALSN RHLRTLLCDS CRCRPSYVRC  60
LDHRMFMCHG CDQSIHDISS QHQRRAVSSY LGCPSAKDFA ALWGFELNEM DDNPAQDLSL  120
SNSCVSMNPN AVNLENLRQS CSRIGVSSCK SSVTSLPAAG HNIGSNSQRT KVINKGQQQQ  180
NTSFILQQIL DLKKLQLTEG DSHLPFICAL EQADTTSSIC NSSKNVDSNL VQDIGTNLHQ  240
SDNPLDELNA DPLPLSFTHL ENLSSSSTSG MLLYGESFWQ CKSPIHDSQG IIGTPRPIRP  300
SYSTISFSVS RFSAESSGTD CLDSGLSPIT QGEASGISPD LDSLHSEARE NAMMRYKEKK  360
KARLHERQTR SASQKARADV QKRVKGRFAK SEDHDSDNAN VTRSY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	4e-32	CO-like family protein