PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022734453.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 594aa    MW: 64573.3 Da    PI: 9.7376
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022734453.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.9e-057193123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    + C+ C+k F r  nL+ H r H
  XP_022734453.1 71 FICEVCKKGFQREQNLQLHRRGH 93
                    89*******************88 PP

2zf-C2H213.10.00029147169123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k++  +s+ k H +t+
  XP_022734453.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169
                     58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 594 aa     Download sequence    
MAASSSSGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP QKKKRNQPGT PNPDAEVIAL  60
SPKTLMATNR FICEVCKKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV  120
HHDPSRALGD LTGIKKHYSR KHGEKRWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT  180
LFSRRDSFIT HRAFCDALAQ ESARHPPSLN PIGYHFYGSS NTSLGLSQVG TQISSIQGQN  240
NQTGDILRHG DGGRSTQFDH LLSPSMGSSS SFRPQQPMVS SAAFLMQESN QNFNQEHQPQ  300
QGLLGNSKSF QGLMQFPDMQ NNTSNPPSAA NLFNLSFLSN SSNTSIINNS NNANADNNLT  360
SSGLLISDHF NNENVGGRGT SEASNLFSNN IMGDQITSNI PSFFTSSVQN NNMVPQMSAT  420
ALLQKAVQIG STSSNNNSAT LLRSFSTSST GTKSSDFGGI LGDSTVKNLH ELMNSLASGN  480
SSIFGGGFGG VNTYSTAQGL ESPYLNRNSM EQEKQQQQKQ NLNVSVGGSD RLTRDFLGVG  540
QMVRSMSGGG VAQRVQQSQQ QQEGMGLSAL GSERNTNTTA QAGHQSFGGG ESFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02070.11e-113C2H2 family protein