PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022734452.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 594aa MW: 64573.3 Da PI: 9.7376 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.9e-05 | 71 | 93 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k F r nL+ H r H XP_022734452.1 71 FICEVCKKGFQREQNLQLHRRGH 93 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00029 | 147 | 169 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022734452.1 147 WKCEKCSKRYAVQSDWKAHSKTC 169 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 594 aa Download sequence |
MAASSSSGPF FGIREEDQNQ MKQQHSSTPT SSTGPAPPPP QKKKRNQPGT PNPDAEVIAL 60 SPKTLMATNR FICEVCKKGF QREQNLQLHR RGHNLPWKLR QKTTKEVKRK VYLCPEPTCV 120 HHDPSRALGD LTGIKKHYSR KHGEKRWKCE KCSKRYAVQS DWKAHSKTCG TREYRCDCGT 180 LFSRRDSFIT HRAFCDALAQ ESARHPPSLN PIGYHFYGSS NTSLGLSQVG TQISSIQGQN 240 NQTGDILRHG DGGRSTQFDH LLSPSMGSSS SFRPQQPMVS SAAFLMQESN QNFNQEHQPQ 300 QGLLGNSKSF QGLMQFPDMQ NNTSNPPSAA NLFNLSFLSN SSNTSIINNS NNANADNNLT 360 SSGLLISDHF NNENVGGRGT SEASNLFSNN IMGDQITSNI PSFFTSSVQN NNMVPQMSAT 420 ALLQKAVQIG STSSNNNSAT LLRSFSTSST GTKSSDFGGI LGDSTVKNLH ELMNSLASGN 480 SSIFGGGFGG VNTYSTAQGL ESPYLNRNSM EQEKQQQQKQ NLNVSVGGSD RLTRDFLGVG 540 QMVRSMSGGG VAQRVQQSQQ QQEGMGLSAL GSERNTNTTA QAGHQSFGGG ESFQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G02070.1 | 1e-113 | C2H2 family protein |