PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022734403.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 516aa MW: 56941.1 Da PI: 9.3849 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11 | 0.0014 | 365 | 387 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC C+k+F ++ L H +H XP_022734403.1 365 YKCLTCKKTFDSPRALGGHTARH 387 9**************99999888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 516 aa Download sequence |
MEQNQEKKFV CKFCNKRYPC GKSLGGHIRT HMNIENYAEA EEGAAELSKN KLLSSSNSRN 60 IKRVAEAESG GLSAAYGLRE NPKKTKRFSD PGNASLLKEM ICKECGKGFQ SLKALCGHMA 120 CHSEKERVFQ KFEDHSGNSD KQKLVMDSQS DTETSAPSRR RRSKRIRYKA IGVYSNNSVS 180 LANGSSSVSE IEQEQEEVAM CLMLLSRDSG CKKGLNSVAD SSDNNSVVFE AKSSSIDVRI 240 TIKNDMKCVS NSGELLKMKK QRDNNLKSAE SGPSSENSDS GYFSNGPKKL KVESGSGYED 300 FDENFGKSLS KFKCVKTEFP KDLISEIGDN RADRALTKYD LRRSAKNDYY SPEYLCTSSS 360 KGSKYKCLTC KKTFDSPRAL GGHTARHTKV NDCSESIHDS GEDSLTNDSF PVPMTYRKVT 420 KFSHGKTLSI CRGSSGNAGK RLGSKKNKGH ECPFCFRVFK SGQALGGHKR SHFIGGSKDR 480 TLVIKQNSPE MPALIDLNLP APVEEDAMVN AGLMPW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26610.1 | 2e-78 | C2H2 family protein |