PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022734403.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 516aa    MW: 56941.1 Da    PI: 9.3849
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022734403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2110.0014365387123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ykC  C+k+F ++  L  H  +H
  XP_022734403.1 365 YKCLTCKKTFDSPRALGGHTARH 387
                     9**************99999888 PP

Sequence ? help Back to Top
Protein Sequence    Length: 516 aa     Download sequence    
MEQNQEKKFV CKFCNKRYPC GKSLGGHIRT HMNIENYAEA EEGAAELSKN KLLSSSNSRN  60
IKRVAEAESG GLSAAYGLRE NPKKTKRFSD PGNASLLKEM ICKECGKGFQ SLKALCGHMA  120
CHSEKERVFQ KFEDHSGNSD KQKLVMDSQS DTETSAPSRR RRSKRIRYKA IGVYSNNSVS  180
LANGSSSVSE IEQEQEEVAM CLMLLSRDSG CKKGLNSVAD SSDNNSVVFE AKSSSIDVRI  240
TIKNDMKCVS NSGELLKMKK QRDNNLKSAE SGPSSENSDS GYFSNGPKKL KVESGSGYED  300
FDENFGKSLS KFKCVKTEFP KDLISEIGDN RADRALTKYD LRRSAKNDYY SPEYLCTSSS  360
KGSKYKCLTC KKTFDSPRAL GGHTARHTKV NDCSESIHDS GEDSLTNDSF PVPMTYRKVT  420
KFSHGKTLSI CRGSSGNAGK RLGSKKNKGH ECPFCFRVFK SGQALGGHKR SHFIGGSKDR  480
TLVIKQNSPE MPALIDLNLP APVEEDAMVN AGLMPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26610.12e-78C2H2 family protein