PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734166.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARR-B

Protein Properties

Length: 667aa MW: 72346.3 Da PI: 6.661

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.3	3.5e-28	225	278	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl XP_022734166.1 225 KPRVVWSVELHQQFVTAVNQL-GIDKAVPKRILELMNVPGLTRENVASHLQKFRL 278 79*****************.******************************8 PP
2	Myb_DNA-binding	39.6	1.2e-12	227	277	1	48
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qk++ XP_022734166.1 227 RVVWSVELHQQFVTAVNQLGIDkaVPKRILELMNvPGLTRENVASHLQKFR 277 678**********************************************97 PP
3	Response_reg	74.9	3.1e-25	42	150	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+ + +++l+q+l++ y +v+ +++++ al+ll+e++ +D++l D+ mp+mdG++ll++ e +lp+i+++a g + + + ++ G XP_022734166.1 42 VLVVDDDITCLRILEQMLRRCLY-IVTICSQAKVALNLLRERKgcFDVVLSDVYMPDMDGYKLLEHVGLEM-DLPVIMMSADGRTSAVMKGIRHG 134 89*******************.***************************************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022734166.1 135 ACDYLIKPIREEELKN 150 ***********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 667 aa Download sequence
MQRVVQSSVS ASAAVTSSYG VSSSCKGVEA VISDNFPVGL RVLVVDDDIT CLRILEQMLR 60 RCLYIVTICS QAKVALNLLR ERKGCFDVVL SDVYMPDMDG YKLLEHVGLE MDLPVIMMSA 120 DGRTSAVMKG IRHGACDYLI KPIREEELKN IWQHVVRKKW NENKELEHSG SLDDNDRRKQ 180 VNDDADYASS VKDGTDVSLK PQKKRNAKEE DEGEIENDDP STSKKPRVVW SVELHQQFVT 240 AVNQLGIDKA VPKRILELMN VPGLTRENVA SHLQKFRLYL KRISGVAQQG VISNPLCGLV 300 EPSVKIGSLG RFDIQALAAS GQIPPHTLAA LHAELLGRPT GNLVTVMDQP AILQASLQGP 360 KCIPVEHGVA FGQPLVKCQS SIAKHLPQSL VSVEDVPSGF GAWPSNNIGT VGSSCSLGGL 420 SSQNGNTLID LLQQQQRLQK PQQQQSAIPE PSCSITVQPS CLVAPSKSAA SFQAGNSPVS 480 LNHNGSLSRT AVTDYILLSP QSHNSSLNIG QVADADLQNR GILSGFIPSA PVSPSVSSCS 540 VNDDTCTSRQ VQISSLTCKA SRHLPGFVHN TCDVQSPYGS AKSGEVLDQA LFNNLEYINK 600 GACLPMRFSV DEFQSPMSCS THGKVFSENI VTRVKQEPNM EFVDNAKAGI PILQQFPPND 660 LMSVFTE

Sequence ? help Back to Top

Protein Sequence Length: 667 aa Download sequence

MQRVVQSSVS ASAAVTSSYG VSSSCKGVEA VISDNFPVGL RVLVVDDDIT CLRILEQMLR  60
RCLYIVTICS QAKVALNLLR ERKGCFDVVL SDVYMPDMDG YKLLEHVGLE MDLPVIMMSA  120
DGRTSAVMKG IRHGACDYLI KPIREEELKN IWQHVVRKKW NENKELEHSG SLDDNDRRKQ  180
VNDDADYASS VKDGTDVSLK PQKKRNAKEE DEGEIENDDP STSKKPRVVW SVELHQQFVT  240
AVNQLGIDKA VPKRILELMN VPGLTRENVA SHLQKFRLYL KRISGVAQQG VISNPLCGLV  300
EPSVKIGSLG RFDIQALAAS GQIPPHTLAA LHAELLGRPT GNLVTVMDQP AILQASLQGP  360
KCIPVEHGVA FGQPLVKCQS SIAKHLPQSL VSVEDVPSGF GAWPSNNIGT VGSSCSLGGL  420
SSQNGNTLID LLQQQQRLQK PQQQQSAIPE PSCSITVQPS CLVAPSKSAA SFQAGNSPVS  480
LNHNGSLSRT AVTDYILLSP QSHNSSLNIG QVADADLQNR GILSGFIPSA PVSPSVSSCS  540
VNDDTCTSRQ VQISSLTCKA SRHLPGFVHN TCDVQSPYGS AKSGEVLDQA LFNNLEYINK  600
GACLPMRFSV DEFQSPMSCS THGKVFSENI VTRVKQEPNM EFVDNAKAGI PILQQFPPND  660
LMSVFTE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.1	1e-122	ARR-B family protein