PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022734096.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 570aa MW: 61815.4 Da PI: 6.6835

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022734096.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.3	1.3e-08	382	429	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_022734096.1 382 SHSLAERVRREKISERMKFLQDLVPGC----NKVIGKAVMLDEIINYVQSLQ 429 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 570 aa Download sequence
MEKDMVFMHE GLDRTAAEQP TWSSSSLGME MQTNELNCAT DQVGSCFFNL NWDNSMDQSD 60 RFESALSSMV SSPAASNAGS ALPASGDNVM IRELIGRLGN ICNSGDISPQ SFIKPNNNTH 120 SSNTSDYTTP LNSPPKLSLS MMDSQIRGSL NVPGLGNQLP NHPSLAPFSA DPGFAERAAR 180 FSCFSSSRNR LGLTEAEFPQ RLVPTMDSVK LSSHQSIKVT GSQANAPESN NNSQQERNFG 240 FDKKISMLTR SSSPENAEFG DSKEESSVSE QIPGGALGNS SIKSQSHANA RKRKSIPRGK 300 AKETPSTAAA EAKVAAQNDE STAKRGKQDG AAANAKEKTE QNGNSKAAND GNQKPSNENS 360 KPSEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKF LQDLVPGCNK VIGKAVMLDE 420 IINYVQSLQR QVEFLSMKLS SVNPRMDINM EALLSKDIFQ SLGSLPHALS SMDSSTPAFP 480 FRYQXQQGLP LNSGISNNIE TQFSMNPLNA ALHKTHGLQL PPIDGFTDAS PQVASIWEDD 540 LQSIVQMGFG QNQTQSYQGS KAVGQVKIEL

Sequence ? help Back to Top

Protein Sequence Length: 570 aa Download sequence

MEKDMVFMHE GLDRTAAEQP TWSSSSLGME MQTNELNCAT DQVGSCFFNL NWDNSMDQSD  60
RFESALSSMV SSPAASNAGS ALPASGDNVM IRELIGRLGN ICNSGDISPQ SFIKPNNNTH  120
SSNTSDYTTP LNSPPKLSLS MMDSQIRGSL NVPGLGNQLP NHPSLAPFSA DPGFAERAAR  180
FSCFSSSRNR LGLTEAEFPQ RLVPTMDSVK LSSHQSIKVT GSQANAPESN NNSQQERNFG  240
FDKKISMLTR SSSPENAEFG DSKEESSVSE QIPGGALGNS SIKSQSHANA RKRKSIPRGK  300
AKETPSTAAA EAKVAAQNDE STAKRGKQDG AAANAKEKTE QNGNSKAAND GNQKPSNENS  360
KPSEPPKDYI HVRARRGQAT DSHSLAERVR REKISERMKF LQDLVPGCNK VIGKAVMLDE  420
IINYVQSLQR QVEFLSMKLS SVNPRMDINM EALLSKDIFQ SLGSLPHALS SMDSSTPAFP  480
FRYQXQQGLP LNSGISNNIE TQFSMNPLNA ALHKTHGLQL PPIDGFTDAS PQVASIWEDD  540
LQSIVQMGFG QNQTQSYQGS KAVGQVKIEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	4e-70	bHLH family protein