PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733997.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 435aa MW: 47276.8 Da PI: 6.8017

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733997.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.7	3.5e-37	35	142	2	111
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............ssssaseceaesssssasn 84 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai+el+++ + +++++++ XP_022733997.1 35 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKPAIDELAELppwnpgtftkpnN---------QEDQNTTT- 119 79**************************************************************6555543222210.........11111111. PP TCP 85 sssgkaaksaakskksqksaasalnla 111 + ++++ + + ++s + + nla XP_022733997.1 120 ----ATDNDKPYQFDIHHSGNLVENLA 142 ....11222222222233333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 435 aa Download sequence
MGDSHHQAAT SSRLGIRHTG GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLIKKAKP AIDELAELPP WNPGTFTKPN NQEDQNTTTA 120 TDNDKPYQFD IHHSGNLVEN LATGSGTHRR TAILMGNEVQ SLQQQEMGDN PNNNSSFLPP 180 SLVSDEIADT IKSFFPLGAS SETPSSSMQF QNYPPDLLSR TNSHSQDLRL SLQSFPEPIL 240 LHHHHQAATA QAHHSEPVLF SGTSQLCGFD GSSAGWEHHH QHPAEIGRFQ RLVAWNSSGG 300 AADTGSGSVS GAGGGNGGVG GFIFGTPPPQ PLPPAFGQNS QLFSQRGPLQ SSNMPLVRAW 360 IDQPISTADE HEHHHHQHHH QIPQNIHHQA ALSGIGFTTS GVFSGFRIPA RIQGEEEEHD 420 SIANKLSSAS SDSHH

Sequence ? help Back to Top

Protein Sequence Length: 435 aa Download sequence

MGDSHHQAAT SSRLGIRHTG GEIVEVQGGH IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH  60
TAIQFYDVQD RLGYDRPSKA VDWLIKKAKP AIDELAELPP WNPGTFTKPN NQEDQNTTTA  120
TDNDKPYQFD IHHSGNLVEN LATGSGTHRR TAILMGNEVQ SLQQQEMGDN PNNNSSFLPP  180
SLVSDEIADT IKSFFPLGAS SETPSSSMQF QNYPPDLLSR TNSHSQDLRL SLQSFPEPIL  240
LHHHHQAATA QAHHSEPVLF SGTSQLCGFD GSSAGWEHHH QHPAEIGRFQ RLVAWNSSGG  300
AADTGSGSVS GAGGGNGGVG GFIFGTPPPQ PLPPAFGQNS QLFSQRGPLQ SSNMPLVRAW  360
IDQPISTADE HEHHHHQHHH QIPQNIHHQA ALSGIGFTTS GVFSGFRIPA RIQGEEEEHD  420
SIANKLSSAS SDSHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	1e-105	TCP family protein