PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733775.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 431aa MW: 47647.7 Da PI: 7.2472

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733775.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.3e-12	359	404	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L++l P+ +k + a++L +AveYIk+Lq XP_022733775.1 359 SIAERVRRTRISERMRKLQSLFPNM----DKQTNTADMLDMAVEYIKDLQ 404 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 431 aa Download sequence
MSVLYSSNFK FPEAELRKNQ EIMDTSHYLQ QHHQYNSGLT CYRSAPSSFH ENLVNGSVTA 60 SGTEFEDYRD IRSTSPEMET FFMLSSNGSG NSNCHDMKEY EEKSVKQEDS LSISLENGFS 120 SSSEVLYQSL PVQSLANGNS VDVANSVESS FGLSSSLGLE NSMQAKLGNG NGSNLARQST 180 SSADFFSNLG LDNGFNGIRK MSTCRACNGT NDETTSTSRL YSNHVSFSSG PSSCSRPMPR 240 IAEVENESVR VSGPENGSLG NVNGSNGHFI PNLRTDSWNN ASLGGLKRAR ESDGDLFCGL 300 SRSQTQNRDC RDCSTALTHH LSLPQTYAEM AVVEKLWQFQ DSVPCKIRAK RGCATHPRSI 360 AERVRRTRIS ERMRKLQSLF PNMDKQTNTA DMLDMAVEYI KDLQKQVKTL TDTKARCSCS 420 SKHKPYLNLS T

Sequence ? help Back to Top

Protein Sequence Length: 431 aa Download sequence

MSVLYSSNFK FPEAELRKNQ EIMDTSHYLQ QHHQYNSGLT CYRSAPSSFH ENLVNGSVTA  60
SGTEFEDYRD IRSTSPEMET FFMLSSNGSG NSNCHDMKEY EEKSVKQEDS LSISLENGFS  120
SSSEVLYQSL PVQSLANGNS VDVANSVESS FGLSSSLGLE NSMQAKLGNG NGSNLARQST  180
SSADFFSNLG LDNGFNGIRK MSTCRACNGT NDETTSTSRL YSNHVSFSSG PSSCSRPMPR  240
IAEVENESVR VSGPENGSLG NVNGSNGHFI PNLRTDSWNN ASLGGLKRAR ESDGDLFCGL  300
SRSQTQNRDC RDCSTALTHH LSLPQTYAEM AVVEKLWQFQ DSVPCKIRAK RGCATHPRSI  360
AERVRRTRIS ERMRKLQSLF PNMDKQTNTA DMLDMAVEYI KDLQKQVKTL TDTKARCSCS  420
SKHKPYLNLS T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	4e-62	bHLH family protein