PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022733742.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family Whirly
Protein Properties Length: 276aa    MW: 31086.2 Da    PI: 9.7778
Description Whirly family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022733742.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Whirly211.11.1e-65992371139
          Whirly   1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 
                     s+yk+ka l+v++++p+f+ ldsg++kl+r+G++ll++a+a+++r+ydW++kq+f+ls+te+++l++l ++esceffhdp++++s+eGkvrk+lk
  XP_022733742.1  99 SIYKGKAVLTVEPKAPEFVPLDSGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLRARESCEFFHDPFKGKSEEGKVRKVLK 193
                     7********************************************************************************************** PP

          Whirly  96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139
                     veP+pdGsG+f+nl v+n+l++ +e++s+P+++aef+vl+s+++
  XP_022733742.1 194 VEPFPDGSGHFFNLGVQNKLLNMDENISIPITRAEFTVLNSAFS 237
                     ****************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MLQLQFLSSP RLSVQTLNPD SNSNTKPFPP FSFSFSSLKS TQTHAFKFNP LSLTPKPSNF  60
SLKCRQSEYF DQKQRFNNSS PTSWPPPLGL PPRFYVGHSI YKGKAVLTVE PKAPEFVPLD  120
SGAFKLSREG FVLLQFAPAA GVRQYDWSRK QVFSLSVTEI GTLISLRARE SCEFFHDPFK  180
GKSEEGKVRK VLKVEPFPDG SGHFFNLGVQ NKLLNMDENI SIPITRAEFT VLNSAFSFIL  240
PYLLGWHAYA NSIKPDETSH GNNANPRYGG DYEWSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14410.11e-123Whirly family protein