PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022733741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | Whirly | ||||||||
Protein Properties | Length: 276aa MW: 31155.3 Da PI: 9.8984 | ||||||||
Description | Whirly family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Whirly | 211.1 | 1.1e-65 | 99 | 237 | 1 | 139 |
Whirly 1 svyktkaalkvkavrptfealdsgnlklkraGglllelanataerkydWekkqsfalsatevaelvdlaskesceffhdpaakgsneGkvrkalk 95 s+yk+ka l+v++++p+f+ ldsg++kl+r+G++ll++a+a+++r+ydW++kq+f+ls+te+++l++l ++esceffhdp++++s+eGkvrk+lk XP_022733741.1 99 SIYKGKAVLTVEPKAPEFVPLDSGAFKLSREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLRARESCEFFHDPFKGKSEEGKVRKVLK 193 7********************************************************************************************** PP Whirly 96 vePlpdGsGlfvnlsvtnslvkgnesfsvPvskaefavlrsllv 139 veP+pdGsG+f+nl v+n+l++ +e++s+P+++aef+vl+s+++ XP_022733741.1 194 VEPFPDGSGHFFNLGVQNKLLNMDENISIPITRAEFTVLNSAFS 237 ****************************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 276 aa Download sequence |
MLQLQFLSSP RLSVQTLNPD SNSNTKPFPP FSFSFSSLKS TQTHAFKFNP LSLTPKPSNF 60 SLKCRQSEYF DQKQRFNNSS PTSWPPPLGL PPRFYVGHSI YKGKAVLTVE PKAPEFVPLD 120 SGAFKLSREG FVLLQFAPAA GVRQYDWSRK QVFSLSVTEI GTLISLRARE SCEFFHDPFK 180 GKSEEGKVRK VLKVEPFPDG SGHFFNLGVQ NKLLNMDENI SIPITRAEFT VLNSAFSFIL 240 PYLLGWHAYA NSIKPDETSH GNNANPRYGG DYEWSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14410.1 | 1e-123 | Whirly family protein |