PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733636.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 842aa MW: 92975.5 Da PI: 4.5867

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733636.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	11.7	0.00048	639	676	13	55
HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R+ i +++ eLr ++P++ +Kls Le++++++ Lq XP_022733636.1 639 RQLIQDRIKELRGIIPHS-----GKLSIDHLLERTIKHLLFLQ 676 67799**********9.....9**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 842 aa Download sequence
MGSMLKQILK NLCCSNGWSY GVFWRFDQRN SMLLTMEDAY SEEQMGPLVD SMLLKFHILS 60 EGIIGQAAFT GKHQWIFSDS HDKGLDSTGN QNIFQDESEV QNQFSSGIKT IAIIPVERRG 120 VLQFGSTQKI SERWEFLNET KNLFYDLGSC HGLTPLEIET CNLDGFFASL PSCGNIYKEN 180 LTTEQGGCSR EQKGWPCSLE NLTESSCFSE IQDQITNSVQ QNFSHLRSQL LTSSREAQII 240 SSDKFFPVNC LAADIPCIST WSSEGSILTS FETSLPSERG MWDSRNKLPK RANNLVPSGN 300 TEQNLLDGST LTSFYSMREL VDAELPTLDS FGKTEENQYS LGTNDGLLNS AISLQRVTEE 360 LNPADFTTDL SSSFTLDDLS QWFSPSPQYN INGAGDAMTS GPSCSIGVTS VSSTLIGDDT 420 VIDIPVRQAA NSLQSSITDT LISNVEKSTI FHDNGNDLFN TVGLDLGFGK TGEFFEDIMV 480 PLLVVDNSAV TSGMSESISE LDVSSKTGKQ KGLFSELGLK ELLDGVSNSS YVTESSVEDQ 540 FPTTKRGKIE SSSSNFCQDQ FVGLSCSGGS MNLVQYSRNW DKSNNTIFNK EIHQKSQVGG 600 WIDDSYSVNA GHAIVATSKK PTRKRARPGE STRPRPKDRQ LIQDRIKELR GIIPHSGKLS 660 IDHLLERTIK HLLFLQGVTK YADKIKQVDE PKLIGQENGM LTKHNKMSGG ATWAFEVGAQ 720 SIPIVVKDLN PPGQMLIEML CEDRGFFLEI VDVIRGLGLN ILKGVMELQE DKIWARFIVE 780 ANEQVERTNI ICSLLLLLQQ TGTSGIDYAS QPSRDMDGGI SLLNNFQQPL LLPPVSMAET 840 LQ

Sequence ? help Back to Top

Protein Sequence Length: 842 aa Download sequence

MGSMLKQILK NLCCSNGWSY GVFWRFDQRN SMLLTMEDAY SEEQMGPLVD SMLLKFHILS  60
EGIIGQAAFT GKHQWIFSDS HDKGLDSTGN QNIFQDESEV QNQFSSGIKT IAIIPVERRG  120
VLQFGSTQKI SERWEFLNET KNLFYDLGSC HGLTPLEIET CNLDGFFASL PSCGNIYKEN  180
LTTEQGGCSR EQKGWPCSLE NLTESSCFSE IQDQITNSVQ QNFSHLRSQL LTSSREAQII  240
SSDKFFPVNC LAADIPCIST WSSEGSILTS FETSLPSERG MWDSRNKLPK RANNLVPSGN  300
TEQNLLDGST LTSFYSMREL VDAELPTLDS FGKTEENQYS LGTNDGLLNS AISLQRVTEE  360
LNPADFTTDL SSSFTLDDLS QWFSPSPQYN INGAGDAMTS GPSCSIGVTS VSSTLIGDDT  420
VIDIPVRQAA NSLQSSITDT LISNVEKSTI FHDNGNDLFN TVGLDLGFGK TGEFFEDIMV  480
PLLVVDNSAV TSGMSESISE LDVSSKTGKQ KGLFSELGLK ELLDGVSNSS YVTESSVEDQ  540
FPTTKRGKIE SSSSNFCQDQ FVGLSCSGGS MNLVQYSRNW DKSNNTIFNK EIHQKSQVGG  600
WIDDSYSVNA GHAIVATSKK PTRKRARPGE STRPRPKDRQ LIQDRIKELR GIIPHSGKLS  660
IDHLLERTIK HLLFLQGVTK YADKIKQVDE PKLIGQENGM LTKHNKMSGG ATWAFEVGAQ  720
SIPIVVKDLN PPGQMLIEML CEDRGFFLEI VDVIRGLGLN ILKGVMELQE DKIWARFIVE  780
ANEQVERTNI ICSLLLLLQQ TGTSGIDYAS QPSRDMDGGI SLLNNFQQPL LLPPVSMAET  840
LQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31280.1	6e-46	bHLH family protein