PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022733262.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 479aa MW: 53974.4 Da PI: 6.5741

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022733262.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	44.9	2.7e-14	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT+eEd++l + + ++G+++W+tI +++ +t qc+ rw++yl XP_022733262.1 25 TWTQEEDDILREQISLHGTENWATIVSKFK-DKTTRQCRRRWYTYL 69 6**************************9.***********97 PP
2	Myb_DNA-binding	43.6	6.7e-14	75	118	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W++eEd ll +a k +G++ W+ Ia+ + gRt++ +k+r+ + XP_022733262.1 75 KGGWSPEEDMLLCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFST 118 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MQETKKNGGG GRNEDSKKKE RHIVTWTQEE DDILREQISL HGTENWATIV SKFKDKTTRQ 60 CRRRWYTYLN SDFKKGGWSP EEDMLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC 120 KKRAKYEALA KEITTSCINP NNKRILLQNG FSTDGTTECT APVKRMRRSH ISDLSENCNF 180 GDRAHIVPGT IINQQLRHPF AVLGQNLQHV DNVVVQSQVN NVKDVFNDAQ NNRTQGTFLN 240 KDDPKITALM QQAELLSSLA LKVNTDKTEQ SLENAWKVLQ DFLNQSKENV IFRYTISDID 300 FQLEDFKDLL EDLRSSNEGS RLSWRQPDLH EESPASSEYS TGSILMHHLD GEKGEETEVK 360 IDALHQDIPS SHIGEQNCRS EEAKRALCSA NTNHVEIIPT CDDQTNIVVA STSSSAELSS 420 PVQVTPLFSS LAAGIPSPKF SESERNFLLK TLGMESPSPN PGNNLSQPPT CKRVLLHSL

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MQETKKNGGG GRNEDSKKKE RHIVTWTQEE DDILREQISL HGTENWATIV SKFKDKTTRQ  60
CRRRWYTYLN SDFKKGGWSP EEDMLLCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFSTLC  120
KKRAKYEALA KEITTSCINP NNKRILLQNG FSTDGTTECT APVKRMRRSH ISDLSENCNF  180
GDRAHIVPGT IINQQLRHPF AVLGQNLQHV DNVVVQSQVN NVKDVFNDAQ NNRTQGTFLN  240
KDDPKITALM QQAELLSSLA LKVNTDKTEQ SLENAWKVLQ DFLNQSKENV IFRYTISDID  300
FQLEDFKDLL EDLRSSNEGS RLSWRQPDLH EESPASSEYS TGSILMHHLD GEKGEETEVK  360
IDALHQDIPS SHIGEQNCRS EEAKRALCSA NTNHVEIIPT CDDQTNIVVA STSSSAELSS  420
PVQVTPLFSS LAAGIPSPKF SESERNFLLK TLGMESPSPN PGNNLSQPPT CKRVLLHSL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.2	0.0	MYB family protein