PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022733105.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 158aa MW: 17544.1 Da PI: 7.9603 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.8 | 0.00022 | 60 | 87 | 22 | 54 |
HHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksL 54 L++l+ + +K + a++L +A+eYI+ L XP_022733105.1 60 ALQQLVSPY-----GKTDTASVLLEAMEYIRFL 87 455555554.....9****************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 158 aa Download sequence |
MQTLCSCEEG IDIGKMMENK RIPCSVDHSS FSSLASKRQK ADMSISAKDR KEKLGEHVVA 60 LQQLVSPYGK TDTASVLLEA MEYIRFLHEQ VKVLSAPYLQ TTPTNNMQDV EHYSLGNRGL 120 CLVPISYTVE VARSNGADIW APIKSTSAKF NKAISQFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G05710.3 | 3e-62 | bHLH family protein |