PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732932.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 349aa MW: 39368.6 Da PI: 6.7806 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 64.3 | 1.3e-20 | 10 | 53 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 + en+ rq t++kR++gi+KKA+ELS+LCd+e+ +++fs+t+k XP_022732932.1 10 KLENTNGRQATYAKRKHGIMKKANELSILCDVEIILLMFSPTNK 53 6799*************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MGRVKLKIKK LENTNGRQAT YAKRKHGIMK KANELSILCD VEIILLMFSP TNKPSLCIGK 60 GSIEEIIEKF AQLTPQERVK RKLESLEALK KTFKKLDHDV NIHEFLGTST QTIEDLTNQA 120 RLLQARLSEM HRRLSCWTNI DKINNVEHLG QMEDSLKEYL NQIRAHKENL GKQQLLSLEC 180 TSQFQNEMHV PFRMGIEQQL QSLDWMPNND SRHVALSEDP NLIPRRDVEC SASSSFGSYS 240 GYFGTAKSSE LSSSGQENGL LNNLNGNASL QLQPGGQCPF SYDLNILNDA KFPPVEVMNF 300 QETPADYHVN GVLEGLRAGY DTTQGCWAST SSPCAVTIFD EPLYSRQLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03060.2 | 2e-95 | M-type_MADS family protein |