PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732930.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 350aa    MW: 39455.7 Da    PI: 6.7806
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732930.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.31.3e-201053245
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45
                    + en+  rq t++kR++gi+KKA+ELS+LCd+e+ +++fs+t+k
  XP_022732930.1 10 KLENTNGRQATYAKRKHGIMKKANELSILCDVEIILLMFSPTNK 53
                    6799*************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MGRVKLKIKK LENTNGRQAT YAKRKHGIMK KANELSILCD VEIILLMFSP TNKPSLCIGK  60
GSSIEEIIEK FAQLTPQERV KRKLESLEAL KKTFKKLDHD VNIHEFLGTS TQTIEDLTNQ  120
ARLLQARLSE MHRRLSCWTN IDKINNVEHL GQMEDSLKEY LNQIRAHKEN LGKQQLLSLE  180
CTSQFQNEMH VPFRMGIEQQ LQSLDWMPNN DSRHVALSED PNLIPRRDVE CSASSSFGSY  240
SGYFGTAKSS ELSSSGQENG LLNNLNGNAS LQLQPGGQCP FSYDLNILND AKFPPVEVMN  300
FQETPADYHV NGVLEGLRAG YDTTQGCWAS TSSPCAVTIF DEPLYSRQLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03060.21e-93M-type_MADS family protein