PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732921.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27984.8 Da PI: 8.5648

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732921.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	98.7	2.4e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdae+a+iifs++gklye++s XP_022732921.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEIALIIFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	95.2	1e-31	84	175	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 + ea + s+qqe+ kLk+++e Lqr+qR+llGedL++L+ keL++Le+qL++slk+iRs++++++l+q+ +lq+ke+ l+e+nk+L+++l+e XP_022732921.1 84 TREALELSSQQEYLKLKARYEALQRSQRNLLGEDLGPLNSKELESLEKQLDSSLKQIRSTRTQYMLDQLADLQRKEHLLNEANKTLKQRLME 175 556666789*******************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEIALIIFSN RGKLYEFCSS 60 SSTIKTLERY QKCNYGAPET NVSTREALEL SSQQEYLKLK ARYEALQRSQ RNLLGEDLGP 120 LNSKELESLE KQLDSSLKQI RSTRTQYMLD QLADLQRKEH LLNEANKTLK QRLMEGYQVN 180 SLQLNPNPED VGYGRQPTHQ PQDDGFFHPL ECEPTLQIGY QHDPISVVTV SPSMNNYMTG 240 WLP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G24260.1	1e-128	MIKC_MADS family protein