PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732869.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 477aa MW: 52793.1 Da PI: 7.3028

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732869.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.2	0.0011	124	146	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+Cg s+++ ++ H t+ XP_022732869.1 124 FECPICGASYRSEEEVSIHVETC 146 89*****************9887 PP

Sequence ? help Back to Top
Protein Sequence Length: 477 aa Download sequence
MDEMKDKWKG LMKKVNNQFS SSSSSSGKFK GQGRVLGSSS SGSVNPVLTR PTQSQTPNPK 60 PNPSSSSSNS KPVLPSKPPN TDQNKPSSIN NPGPIRKTEN GFDPYGSLIT SSKVSKNAFT 120 LNVFECPICG ASYRSEEEVS IHVETCVNTN SLDRKGLDGD SGSSENELEK SRSELEAFIG 180 SFISGKPPEG SVDVVLRLLR NIVKEPGNDK FRKIRMSNPK IREAIGEVAG GVELLEFVGF 240 ELKEEGGEVW AVMEIPREEQ ISLINKTITL LEPGKIEQLK KNENIAPAAP AEKEESVEPK 300 KIDRQIRVFF SVPESVAAKI ELPDSFYNLS VEELKREADM RKKKIAESQL LIPKSYKEKQ 360 AKAARRRYRR TIIRIQFPDG VVLQGVFAPW EPTSALYEFV SSALKEPCLE FELLDHVPVK 420 RQVIPSFPVA GEKARTLEEE DLVPSALIKF KPIETDSFVF TGLSNQLLGI IEPLVTD

Sequence ? help Back to Top

Protein Sequence Length: 477 aa Download sequence

MDEMKDKWKG LMKKVNNQFS SSSSSSGKFK GQGRVLGSSS SGSVNPVLTR PTQSQTPNPK  60
PNPSSSSSNS KPVLPSKPPN TDQNKPSSIN NPGPIRKTEN GFDPYGSLIT SSKVSKNAFT  120
LNVFECPICG ASYRSEEEVS IHVETCVNTN SLDRKGLDGD SGSSENELEK SRSELEAFIG  180
SFISGKPPEG SVDVVLRLLR NIVKEPGNDK FRKIRMSNPK IREAIGEVAG GVELLEFVGF  240
ELKEEGGEVW AVMEIPREEQ ISLINKTITL LEPGKIEQLK KNENIAPAAP AEKEESVEPK  300
KIDRQIRVFF SVPESVAAKI ELPDSFYNLS VEELKREADM RKKKIAESQL LIPKSYKEKQ  360
AKAARRRYRR TIIRIQFPDG VVLQGVFAPW EPTSALYEFV SSALKEPCLE FELLDHVPVK  420
RQVIPSFPVA GEKARTLEEE DLVPSALIKF KPIETDSFVF TGLSNQLLGI IEPLVTD