PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732791.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 389aa MW: 41374.6 Da PI: 8.2301

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732791.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	119.9	3e-37	88	200	2	104
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa.........sec..eaesssssasns 85 ++k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++t+ WLl+ a++ai+e+tgt++++a + ++++++s+++n+ XP_022732791.1 88 TAKRSSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETVRWLLEHAEQAIIEATGTGTIPAiavsvdgtlK-IptTSGTNVSNNNNN 181 6899************************************************************999995444443331.033444444444444 PP TCP 86 ssgkaaksaakskksqksa 104 +++++ ++a++k++++ + XP_022732791.1 182 NNNNQIDDSATKKRKRQAN 200 4444444444333333333 PP

Sequence ? help Back to Top
Protein Sequence Length: 389 aa Download sequence
MDPDDDGGMS DLSNSAGEPN TATATTANGK TKNNDKNCEN SAFQLMQLKE ESDPDHKTHP 60 LPPIGVVPVG MQIQQMPMQI PMPMPVTTAK RSSTKDRHTK VEGRGRRIRI PATCAARIFQ 120 LTRELGHKSD GETVRWLLEH AEQAIIEATG TGTIPAIAVS VDGTLKIPTT SGTNVSNNNN 180 NNNNNQIDDS ATKKRKRQAN SEFCDIDDGI PFAVSQQQQQ QLVTQASGLA PLTPQGLVPV 240 WAVGNTGMMV PANAFWMIPQ PTATAAGNGL ANKQPSPQIW ALSPTLAPVF NVAARPVSSF 300 VATTNQGQAV VCNGLSTLAV NTSSTPVGAT MAKKSTMVPS VSSGGNGSCS TVGKVQMLRD 360 FSLEIYDKQE LQFMGRSGNH QQMQAASKQ

Sequence ? help Back to Top

Protein Sequence Length: 389 aa Download sequence

MDPDDDGGMS DLSNSAGEPN TATATTANGK TKNNDKNCEN SAFQLMQLKE ESDPDHKTHP  60
LPPIGVVPVG MQIQQMPMQI PMPMPVTTAK RSSTKDRHTK VEGRGRRIRI PATCAARIFQ  120
LTRELGHKSD GETVRWLLEH AEQAIIEATG TGTIPAIAVS VDGTLKIPTT SGTNVSNNNN  180
NNNNNQIDDS ATKKRKRQAN SEFCDIDDGI PFAVSQQQQQ QLVTQASGLA PLTPQGLVPV  240
WAVGNTGMMV PANAFWMIPQ PTATAAGNGL ANKQPSPQIW ALSPTLAPVF NVAARPVSSF  300
VATTNQGQAV VCNGLSTLAV NTSSTPVGAT MAKKSTMVPS VSSGGNGSCS TVGKVQMLRD  360
FSLEIYDKQE LQFMGRSGNH QQMQAASKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51910.2	1e-63	TCP family protein