PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732716.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

CO-like

Protein Properties

Length: 329aa MW: 36389.7 Da PI: 6.57

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.4	1.6e-09	4	47	4	41
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 + C+ +++ ++lfC+ ++ +lC +C +++H H +v+ XP_022732716.1 4 KLCDSCKSATATLFCRADSAFLCSNCDSKIHTAnklasrHARVS 47 68*****************************5566777777665 PP
2	zf-B_box	23.2	1.4e-07	47	91	4	42
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 +C+ +e+ +++ C+ + lC +C +H+ H++vp+ XP_022732716.1 47 SVCEVCEQAPAHVTCKADAAALCITCDRDIHSAnplacrHERVPV 91 68*****************************66999999999986 PP
3	CCT	68.9	1.3e-23	266	309	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eKrk+RkFeK+irY+sRKa+Ae RpR+KGrF+k++ XP_022732716.1 266 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRT 309 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MASKLCDSCK SATATLFCRA DSAFLCSNCD SKIHTANKLA SRHARVSVCE VCEQAPAHVT 60 CKADAAALCI TCDRDIHSAN PLACRHERVP VTPFYDSVNS VHAVNFLDQR YFSDVDGDAD 120 VSREEAEAAS WLLPNPNHKA VESPDMNTGQ CVFSEMDPYL ELDYGPVDPK MEAQEQNSSG 180 TDGVVPVQSK SVQAPVINDH CFDLDFTRSK PLAYGYNPHC LNHSVSSSSL DVGVVPDGSV 240 MTDVSNPYGA GTESKHQTMQ LSSADREARV LRYREKRKNR KFEKTIRYAS RKAYAEMRPR 300 IKGRFAKRTE IEVEVDRSNI YGFGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24930.1	1e-143	CO-like family protein