PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732633.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 541aa MW: 57285.3 Da PI: 6.2377

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732633.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.7	7.8e-12	302	347	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+Pk+ K +Ka++L + +eY+k Lq XP_022732633.1 302 HSIAERLRREKIAERMKNLQELVPKS-----NKTDKASMLDEIIEYVKFLQ 347 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MLSTADTHLL YVNVKERSSW VQCESDQSNA LLPSSLGVYR DDKNSSSVSM ISSNHSLECL 60 AAHNTPSLVP SGESGCGVEH GLMSGEGGPQ MVGENCSGNS SKEMLNGSLG FGNLGLQFNT 120 AVLSSGSLNL GSSNDLPVVG DMTPSLSFNE RGHILCNGGE SSEFRRSLTG LETLSPIPQV 180 WHPQPYDGVS SIPTLMGQTR MQSSRLQGEN GNVDEEGNIN RFFVEIDKIL QPENLSASIN 240 PKGKQDMQNS LCSSFPADHQ ITKTTIGLPS LLQSASPTPN SGCNGIGKPR ARARRGQATD 300 PHSIAERLRR EKIAERMKNL QELVPKSNKT DKASMLDEII EYVKFLQLQV KVLSMSRLGA 360 AGAVVPLITD GQAEGSKGLS LTPLVGHGVD LSPSPDQVVI EQEVVKLMES NVTMAMQYLQ 420 SKGLCLMPIA LAAAISNGKT SSSSAPASEE RKKFGFTNIP KNNDIIHNTC SSNGHVQNCN 480 CSSSSSSSSS SSSSGSLSGD GIHPMTSDGN FMIGKISAGI MANGCNGTFK QEEVNTLCTA 540 K

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MLSTADTHLL YVNVKERSSW VQCESDQSNA LLPSSLGVYR DDKNSSSVSM ISSNHSLECL  60
AAHNTPSLVP SGESGCGVEH GLMSGEGGPQ MVGENCSGNS SKEMLNGSLG FGNLGLQFNT  120
AVLSSGSLNL GSSNDLPVVG DMTPSLSFNE RGHILCNGGE SSEFRRSLTG LETLSPIPQV  180
WHPQPYDGVS SIPTLMGQTR MQSSRLQGEN GNVDEEGNIN RFFVEIDKIL QPENLSASIN  240
PKGKQDMQNS LCSSFPADHQ ITKTTIGLPS LLQSASPTPN SGCNGIGKPR ARARRGQATD  300
PHSIAERLRR EKIAERMKNL QELVPKSNKT DKASMLDEII EYVKFLQLQV KVLSMSRLGA  360
AGAVVPLITD GQAEGSKGLS LTPLVGHGVD LSPSPDQVVI EQEVVKLMES NVTMAMQYLQ  420
SKGLCLMPIA LAAAISNGKT SSSSAPASEE RKKFGFTNIP KNNDIIHNTC SSNGHVQNCN  480
CSSSSSSSSS SSSSGSLSGD GIHPMTSDGN FMIGKISAGI MANGCNGTFK QEEVNTLCTA  540
K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	1e-58	bHLH family protein