PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732630.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | bHLH | ||||||||
Protein Properties | Length: 546aa MW: 57877.8 Da PI: 5.6285 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 36.6 | 7.9e-12 | 307 | 352 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+Pk+ K +Ka++L + +eY+k Lq XP_022732630.1 307 HSIAERLRREKIAERMKNLQELVPKS-----NKTDKASMLDEIIEYVKFLQ 352 99***********************7.....5******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 546 aa Download sequence |
MDDYLDQFFS SSSLSDVNVK ERSSWVQCES DQSNALLPSS LGVYRDDKNS SSVSMISSNH 60 SLECLAAHNT PSLVPSGESG CGVEHGLMSG EGGPQMVGEN CSGNSSKEML NGSLGFGNLG 120 LQFNTAVLSS GSLNLGSSND LPVVGDMTPS LSFNERGHIL CNGGESSEFR RSLTGLETLS 180 PIPQVWHPQP YDGVSSIPTL MGQTRMQSSR LQGENGNVDE EGNINRFFVE IDKILQPENL 240 SASINPKGKQ DMQNSLCSSF PADHQITKTT IGLPSLLQSA SPTPNSGCNG IGKPRARARR 300 GQATDPHSIA ERLRREKIAE RMKNLQELVP KSNKTDKASM LDEIIEYVKF LQLQVKVLSM 360 SRLGAAGAVV PLITDGQAEG SKGLSLTPLV GHGVDLSPSP DQVVIEQEVV KLMESNVTMA 420 MQYLQSKGLC LMPIALAAAI SNGKTSSSSA PASEERKKFG FTNIPKNNDI IHNTCSSNGH 480 VQNCNCSSSS SSSSSSSSSG SLSGDGIHPM TSDGNFMIGK ISAGIMANGC NGTFKQEEVN 540 TLCTAK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58010.1 | 2e-58 | bHLH family protein |