PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732629.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 546aa MW: 57877.8 Da PI: 5.6285

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.6	7.9e-12	307	352	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h+++Er RR++i +++ +L+el+Pk+ K +Ka++L + +eY+k Lq XP_022732629.1 307 HSIAERLRREKIAERMKNLQELVPKS-----NKTDKASMLDEIIEYVKFLQ 352 99*********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MDDYLDQFFS SSSLSDVNVK ERSSWVQCES DQSNALLPSS LGVYRDDKNS SSVSMISSNH 60 SLECLAAHNT PSLVPSGESG CGVEHGLMSG EGGPQMVGEN CSGNSSKEML NGSLGFGNLG 120 LQFNTAVLSS GSLNLGSSND LPVVGDMTPS LSFNERGHIL CNGGESSEFR RSLTGLETLS 180 PIPQVWHPQP YDGVSSIPTL MGQTRMQSSR LQGENGNVDE EGNINRFFVE IDKILQPENL 240 SASINPKGKQ DMQNSLCSSF PADHQITKTT IGLPSLLQSA SPTPNSGCNG IGKPRARARR 300 GQATDPHSIA ERLRREKIAE RMKNLQELVP KSNKTDKASM LDEIIEYVKF LQLQVKVLSM 360 SRLGAAGAVV PLITDGQAEG SKGLSLTPLV GHGVDLSPSP DQVVIEQEVV KLMESNVTMA 420 MQYLQSKGLC LMPIALAAAI SNGKTSSSSA PASEERKKFG FTNIPKNNDI IHNTCSSNGH 480 VQNCNCSSSS SSSSSSSSSG SLSGDGIHPM TSDGNFMIGK ISAGIMANGC NGTFKQEEVN 540 TLCTAK

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MDDYLDQFFS SSSLSDVNVK ERSSWVQCES DQSNALLPSS LGVYRDDKNS SSVSMISSNH  60
SLECLAAHNT PSLVPSGESG CGVEHGLMSG EGGPQMVGEN CSGNSSKEML NGSLGFGNLG  120
LQFNTAVLSS GSLNLGSSND LPVVGDMTPS LSFNERGHIL CNGGESSEFR RSLTGLETLS  180
PIPQVWHPQP YDGVSSIPTL MGQTRMQSSR LQGENGNVDE EGNINRFFVE IDKILQPENL  240
SASINPKGKQ DMQNSLCSSF PADHQITKTT IGLPSLLQSA SPTPNSGCNG IGKPRARARR  300
GQATDPHSIA ERLRREKIAE RMKNLQELVP KSNKTDKASM LDEIIEYVKF LQLQVKVLSM  360
SRLGAAGAVV PLITDGQAEG SKGLSLTPLV GHGVDLSPSP DQVVIEQEVV KLMESNVTMA  420
MQYLQSKGLC LMPIALAAAI SNGKTSSSSA PASEERKKFG FTNIPKNNDI IHNTCSSNGH  480
VQNCNCSSSS SSSSSSSSSG SLSGDGIHPM TSDGNFMIGK ISAGIMANGC NGTFKQEEVN  540
TLCTAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58010.1	2e-58	bHLH family protein