PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732213.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 375aa    MW: 41833.9 Da    PI: 7.2275
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732213.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH20.49.4e-07137157526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G C+ Gd+C FaHg
  XP_022732213.1 137 ACPDFRK-GNCRKGDSCEFAHG 157
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    
MMLGETHRPN PTVHVPPWPN LDGDQTTEVY SPLKYNAADN HINNNGNPFY LQEALATLQR  60
YLPSHELDVE SDSELSGLDN PDSPVDAYSC DHFRMFEFKV RRCARGRSHD WTECPYAHPG  120
EKARRRDPRK CHYSGTACPD FRKGNCRKGD SCEFAHGVFE CWLHPARYRT QPCKDGQGCR  180
RRVCFFAHTP DQLRVVSSPD SYDGSPSCAK TLTFWSSPGS GSPPMSPRAE SSPPVSPMAQ  240
SLSRSLGSAS INEMVVSLRN LQLGKVKSLP SWNTQVGCCS PSPSAFGSPR GAVIRPGFFS  300
LPSTPTRNLT HPGIGYLDFC DKVCEEEPMM ERVESGRDLR AKMFEKLSKE NSLERVNPVQ  360
CSEGPDVDWV SDLIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.11e-142C3H family protein