PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732166.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 910aa MW: 100082 Da PI: 7.543

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732166.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.5	1.4e-19	333	433	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ +++ e+ l+++d +g++W++++++ +++s++yvl+ G ++ +L++gD+v+F++++ +++ XP_022732166.1 333 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQSEGLPLKIQDVNGKEWTFQFRFwpNNNSRMYVLE-GVTPCIQSMQLRAGDTVTFSRKD-PGEK 425 99************************555556677***********99899999999.*******************654.8888 PP .EEEEE-S CS B3 92 lvvkvfrk 99 lv++++r+ XP_022732166.1 426 LVIGFRRA 433 99999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 910 aa Download sequence
MGSKICMNSS CGTATTREWK KGWPLRSGGF AHLCYRCGSA YEDNVYCDTF HVEESGWREC 60 RLCSKRLHCG CIASKYLLEL LDYGGVGCTS CAKSSRFHSV RRIQTHGDEI PKGFSGLPMN 120 NAGSIAVEGK AVGDHVDERT LAQLCKIMEV TECNLLPQSQ RGDANASLGQ RRGEEVTCPI 180 GEVGAGFSNA MQPYVQPPSF AKTNNARPAL DIRDLHDSLS QPSLNMTLGG LSGNPNFALP 240 FPSGLADGKE QGKMASSFQQ GQRSRPILPK PSKNGLATSS EVNKSVVPQA RIARPPVEGR 300 GKNHLLPRYW PRITDQELQK LSGDLKSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP 360 PISQSEGLPL KIQDVNGKEW TFQFRFWPNN NSRMYVLEGV TPCIQSMQLR AGDTVTFSRK 420 DPGEKLVIGF RRATNTDTQQ EGQTSSLPNG AHSGETSHSG GIENLSTVSA YSGLLQTPKG 480 GKGPLLNALS EHLGLPDGNI SWGRGDNHGD GANEDPMQQP AVNAEKRRTR NIGSKSKRLL 540 MHNEDALELR LTWEEAQDLL RPPPSVRPSI VTIEDHEFEE YDEPPVFGKR TIFAARPSGT 600 SCRGQEQWAQ CDDCSKWRRL PIDVLLPPKW TCSDNVWDSS RCSCSAPEEI SQKELENLLK 660 VGRDLKKQKL PESPKLAPDS EPSGLDALAS AAVLGDKLGD VGESSVGATT KHPRHRPGCT 720 CIVCIQPPSG KGKHKPTCTC NVCLTVKRRF KTLMLRRKKR QSEREAEISQ KDNNEHKDEP 780 ELNDTRHGHS ENEGSQSRIQ AEVAETSTGQ IDLNCHPNRE ELQLEVPGLN MTSLVQTTGM 840 PVENYIKQNG IASLMSEQQG SLTSHLLSQA NRENDRHLSD EEFLASVGWK RDNRSDEGHK 900 ESSMERNGLQ

Sequence ? help Back to Top

Protein Sequence Length: 910 aa Download sequence

MGSKICMNSS CGTATTREWK KGWPLRSGGF AHLCYRCGSA YEDNVYCDTF HVEESGWREC  60
RLCSKRLHCG CIASKYLLEL LDYGGVGCTS CAKSSRFHSV RRIQTHGDEI PKGFSGLPMN  120
NAGSIAVEGK AVGDHVDERT LAQLCKIMEV TECNLLPQSQ RGDANASLGQ RRGEEVTCPI  180
GEVGAGFSNA MQPYVQPPSF AKTNNARPAL DIRDLHDSLS QPSLNMTLGG LSGNPNFALP  240
FPSGLADGKE QGKMASSFQQ GQRSRPILPK PSKNGLATSS EVNKSVVPQA RIARPPVEGR  300
GKNHLLPRYW PRITDQELQK LSGDLKSTIV PLFEKVLSAS DAGRIGRLVL PKACAEAYFP  360
PISQSEGLPL KIQDVNGKEW TFQFRFWPNN NSRMYVLEGV TPCIQSMQLR AGDTVTFSRK  420
DPGEKLVIGF RRATNTDTQQ EGQTSSLPNG AHSGETSHSG GIENLSTVSA YSGLLQTPKG  480
GKGPLLNALS EHLGLPDGNI SWGRGDNHGD GANEDPMQQP AVNAEKRRTR NIGSKSKRLL  540
MHNEDALELR LTWEEAQDLL RPPPSVRPSI VTIEDHEFEE YDEPPVFGKR TIFAARPSGT  600
SCRGQEQWAQ CDDCSKWRRL PIDVLLPPKW TCSDNVWDSS RCSCSAPEEI SQKELENLLK  660
VGRDLKKQKL PESPKLAPDS EPSGLDALAS AAVLGDKLGD VGESSVGATT KHPRHRPGCT  720
CIVCIQPPSG KGKHKPTCTC NVCLTVKRRF KTLMLRRKKR QSEREAEISQ KDNNEHKDEP  780
ELNDTRHGHS ENEGSQSRIQ AEVAETSTGQ IDLNCHPNRE ELQLEVPGLN MTSLVQTTGM  840
PVENYIKQNG IASLMSEQQG SLTSHLLSQA NRENDRHLSD EEFLASVGWK RDNRSDEGHK  900
ESSMERNGLQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	747	759	KRRFKTLMLRRKK
2	747	760	KRRFKTLMLRRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	0.0	B3 family protein