PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022732162.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HRT-like

Protein Properties

Length: 541aa MW: 60296.7 Da PI: 9.4441

Description

HRT-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022732162.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HRT-like	57.7	2e-18	283	312	1	30
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmR 30 +CGv ledGs+C+++Pv+gRKRC eHKG++ XP_022732162.1 283 TCGVVLEDGSICRKPPVEGRKRCGEHKGQK 312 7***************************98 PP
2	HRT-like	54.5	1.9e-17	372	402	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv ++dGs C+rqPv +RKRC HKG+Ri XP_022732162.1 372 ICGVVMDDGSLCRRQPVSERKRCDLHKGRRI 402 8*****************************7 PP
3	HRT-like	54.2	2.4e-17	461	491	1	31
HRT-like 1 iCGviledGsvCkrqPvkgRKRCeeHKGmRi 31 iCGv+l+dG +C++qP +gR RCeeHKGmRi XP_022732162.1 461 ICGVKLGDGCFCTKQPFRGRVRCEEHKGMRI 491 8*****************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 541 aa Download sequence
MPVIQWRKQD NGHFPGGDPM PMGAAKSAAV VTRLKREDHK RTKHDSHFSK WKVLIGPDDW 60 EDYSVGKEGV ARYRVENLPG SSSSGLYELA IYRSGSSSRD NPGKLDPDKV LVVYLGEADN 120 VRTRLQQYGR TGAHLGRSGS GEKGCACFED IFSRGYSIVY RWAPMENKAD AHRTEAQLLD 180 TFDYAWNKGS NGARRHDNIL QKLNKRAANR SPLAIFSTKN LSFLQKQVGI QIKSSKLLSQ 240 DNEFSKYADG ESYNFLWQVF KFSRSQPRLV SDHGGSNEND TITCGVVLED GSICRKPPVE 300 GRKRCGEHKG QKTKGSSVRL STREKSQLHK ACSEYVVFDN GECNVHGPKI PSFGAVPSLS 360 VDYPEIEHCS PICGVVMDDG SLCRRQPVSE RKRCDLHKGR RIFYSNSQAT RYQTVPYVAF 420 DSYANEASGF DKKSSEVFIP EKVETGVAPQ KPVFNEGYDT ICGVKLGDGC FCTKQPFRGR 480 VRCEEHKGMR IASLRSGLDS RSTSHVFDAH SSSGTSICGA PTRNGSFCQR RAKGKGRCWQ 540 H

Sequence ? help Back to Top

Protein Sequence Length: 541 aa Download sequence

MPVIQWRKQD NGHFPGGDPM PMGAAKSAAV VTRLKREDHK RTKHDSHFSK WKVLIGPDDW  60
EDYSVGKEGV ARYRVENLPG SSSSGLYELA IYRSGSSSRD NPGKLDPDKV LVVYLGEADN  120
VRTRLQQYGR TGAHLGRSGS GEKGCACFED IFSRGYSIVY RWAPMENKAD AHRTEAQLLD  180
TFDYAWNKGS NGARRHDNIL QKLNKRAANR SPLAIFSTKN LSFLQKQVGI QIKSSKLLSQ  240
DNEFSKYADG ESYNFLWQVF KFSRSQPRLV SDHGGSNEND TITCGVVLED GSICRKPPVE  300
GRKRCGEHKG QKTKGSSVRL STREKSQLHK ACSEYVVFDN GECNVHGPKI PSFGAVPSLS  360
VDYPEIEHCS PICGVVMDDG SLCRRQPVSE RKRCDLHKGR RIFYSNSQAT RYQTVPYVAF  420
DSYANEASGF DKKSSEVFIP EKVETGVAPQ KPVFNEGYDT ICGVKLGDGC FCTKQPFRGR  480
VRCEEHKGMR IASLRSGLDS RSTSHVFDAH SSSGTSICGA PTRNGSFCQR RAKGKGRCWQ  540
H

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56780.1	1e-107	HRT-like family protein