PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732119.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 635aa MW: 69481.9 Da PI: 6.555 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.5 | 6.3e-28 | 202 | 255 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+ Lt+e+v+SHLQk+Rl XP_022732119.1 202 KPRVVWSVELHRKFVAAVNQL-GIDKAVPKKILELMNVEKLTRENVASHLQKFRL 255 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 38.5 | 2.7e-12 | 204 | 254 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e++ ++v av+qlG + +k+I + m+ +++t++++ s++qk++ XP_022732119.1 204 RVVWSVELHRKFVAAVNQLGIDkaVPKKILELMNvEKLTRENVASHLQKFR 254 678********************************99************97 PP | |||||||
3 | Response_reg | 75.8 | 1.6e-25 | 20 | 128 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ + ll ++l++ +y +v++++++ al+ll+ ++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a+g+ +++ + + G XP_022732119.1 20 VLAVDDDPTCLLLLDTLLRRCQY-NVTTTSQAITALKLLRGNKnkFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANGDTKLVMKGITHG 112 799********************.***************555555*******************87754.558********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +eel + XP_022732119.1 113 ACDYLLKPVRIEELQN 128 *************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 635 aa Download sequence |
MTVERVISET KDQFPIGMRV LAVDDDPTCL LLLDTLLRRC QYNVTTTSQA ITALKLLRGN 60 KNKFDLVISD VHMPDMDGFK LLELVGLEMD LPVIMLSANG DTKLVMKGIT HGACDYLLKP 120 VRIEELQNIW QHVVRRKKFD QNDWYNSGSQ DKPHMGSGEA AGIGKVDQNG KLNKKRKDQN 180 EDEDEECDEN GHDNEDPSTQ KKPRVVWSVE LHRKFVAAVN QLGIDKAVPK KILELMNVEK 240 LTRENVASHL QKFRLYLKRI SYVANQQAHM VAALGSADST YLRMGSLNGL GDFHRLAGSD 300 QLPNAGFRSF PPSGVLGRLN TPAGLGIHGL PSPGMIQLSH VQNSGNAGND QSKLQSFVIP 360 GNHNANILLG MPMSLELDQL QNNKGVRHIG ELPTADNTTV FPVSGSLIDA RVAGCSNNPL 420 LGVTSNSLML EGSSHQAILH ATNLRDSVST MVFQNGNTLS DFNCIAPASN QLRDSKSNLQ 480 GQASLISCNA GPIIRSDPQE WNAPRKDAPY QSNIMCCSIN SSIPVNGAMV QLGQCLDQNN 540 PVFHRNMDLD SIGPPNFVDP LSIKHNKGES SAMEPLVIDK EGYLIVQQRP QGSYIPDNIG 600 PLGDLASAIM KQDQDKGKPA DGDFGCNAYS LRNCI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-136 | ARR-B family protein |