PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022732109.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 557aa MW: 61712.5 Da PI: 6.1223 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 87.9 | 9.6e-28 | 318 | 371 | 2 | 56 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 +++WtpeLH++Fv+av+qL G ++A+P++ilelmkv+gLt+++v+SHLQkYR++ XP_022732109.1 318 LKVDWTPELHKKFVQAVDQL-GVDQAIPSRILELMKVEGLTRHNVASHLQKYRMH 371 5899****************.********************************96 PP | |||||||
2 | Myb_DNA-binding | 42.9 | 1.1e-13 | 320 | 369 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT+e+++++v+av qlG + +++I + m +g+t+ ++ s++qky+ XP_022732109.1 320 VDWTPELHKKFVQAVDQLGVDqaIPSRILELMKvEGLTRHNVASHLQKYR 369 57***********************************************7 PP | |||||||
3 | Response_reg | 21.6 | 1.1e-08 | 20 | 126 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+ d++ + + +++ le +y +v ++ + eal + + +++ ++ ++ + +G+ +k +++++ +lp i+ + +++ +++ +G XP_022732109.1 20 VLLLDEDSNSAAEIKSKLEAMDY-IVYTFCNENEALSAVSSSPesFHVAIVEVSTNNNNGS--FKFLETAK-DLPTIMTSNIHCISTMMKCIALG 110 7899999999999**********.***************877777*************997..67777766.999*99999889*********** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a +fl Kp +++l++ XP_022732109.1 111 AVEFLRKPLCEDKLRN 126 *********9999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 557 aa Download sequence |
MICTTDDLSA WKDFPKGLRV LLLDEDSNSA AEIKSKLEAM DYIVYTFCNE NEALSAVSSS 60 PESFHVAIVE VSTNNNNGSF KFLETAKDLP TIMTSNIHCI STMMKCIALG AVEFLRKPLC 120 EDKLRNIWQH VVHKAFNAGG NDLSESLKPV KESVVSILHL QLENGKPMNE DSDKAEDASV 180 VYENDCKPPP GSDKYRAPST PQLEQGGRLL DNGDCRDHTN CLTERESGEQ DGESQSVETT 240 SGNALTEVTA PVGRPQGPRE TMVKEDAALV DGTKGESTMS SHPQNRANSK DSHADAEKPN 300 SVSGLNSSCL NKANRKKLKV DWTPELHKKF VQAVDQLGVD QAIPSRILEL MKVEGLTRHN 360 VASHLQKYRM HRRHILPKED DQRWPQRDQT QRSWYPHKPI MAFPPYHSNH VVPVGPPYPM 420 WGAPPHLASI QMWGSQGYPP WQPTEGWHWM PYPVVHADAW GCPVMPPPHE YCSAFAQNAS 480 GFHCSSTMDN RSGMPKSSVE HQLAEEVIDM VVKEAINKPW LPLPLGLKPP STDGVLAELS 540 RQGISTIPPP INGSDSC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18020.3 | 1e-149 | ARR-B family protein |