PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022732084.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 406aa    MW: 44850.6 Da    PI: 8.8031
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022732084.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H222.33.5e-07233255123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     + C+ Cgk F+r  nL+ H+r H
  XP_022732084.1 233 HYCQVCGKGFKRDANLRMHMRAH 255
                     68*******************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    
MISGAASCFP NASQGLPMYP VAAENIVSSS LEAAGSGPEA HTGSLFYNLS ILKDRVHQVQ  60
SLVSIIISPD QTHPESTSLA IASMGSLVQD IILTASSMIF VCQQMSLGTT LGNNSTTELH  120
QQRVRVIPDN GISQQPNFSD NCVGSTVQER GQGFYFSTGQ TTSWYGDHCN NHNNNNSNSS  180
RSLKVSSNGK LERKEMTELP RRSEISEGSQ GISAKNYDII ELDAADLLAK YTHYCQVCGK  240
GFKRDANLRM HMRAHGDEYK TNAALTNPMK NNEGSSNAMG NCSTKLPKKY SCPHEGCRWN  300
QKHAKFQPLK SMICVKNHYK RSHCPKMYVC KRCNRKQFSV LSDLRTHEKH CGDLKWQCSC  360
GTTFSRKDKL MGHVALFVGH SPVLVTNSLT KQGKLEHQSH HDATSQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22890.11e-112C2H2 family protein