PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022732084.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 406aa MW: 44850.6 Da PI: 8.8031 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 22.3 | 3.5e-07 | 233 | 255 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ Cgk F+r nL+ H+r H XP_022732084.1 233 HYCQVCGKGFKRDANLRMHMRAH 255 68*******************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 406 aa Download sequence |
MISGAASCFP NASQGLPMYP VAAENIVSSS LEAAGSGPEA HTGSLFYNLS ILKDRVHQVQ 60 SLVSIIISPD QTHPESTSLA IASMGSLVQD IILTASSMIF VCQQMSLGTT LGNNSTTELH 120 QQRVRVIPDN GISQQPNFSD NCVGSTVQER GQGFYFSTGQ TTSWYGDHCN NHNNNNSNSS 180 RSLKVSSNGK LERKEMTELP RRSEISEGSQ GISAKNYDII ELDAADLLAK YTHYCQVCGK 240 GFKRDANLRM HMRAHGDEYK TNAALTNPMK NNEGSSNAMG NCSTKLPKKY SCPHEGCRWN 300 QKHAKFQPLK SMICVKNHYK RSHCPKMYVC KRCNRKQFSV LSDLRTHEKH CGDLKWQCSC 360 GTTFSRKDKL MGHVALFVGH SPVLVTNSLT KQGKLEHQSH HDATSQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G22890.1 | 1e-112 | C2H2 family protein |