PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731898.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 354aa MW: 40380.7 Da PI: 9.4086

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731898.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.7	5e-14	100	151	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i+ A+e++k+L+ XP_022731898.1 100 QRMTHIAVERNRRKQMNEHLSVLRSLMPES---YVQRGDQASIVGGAIEFVKELE 151 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 354 aa Download sequence
MALETLSSNE FLNFIIYDTI CATPYSSHDS FVTNFSLENS FSSQEQASSA LNCFSMVTPP 60 QCRSKGAEAV DRRPNLTVQG RNKRRRKPRV CKNKEEAETQ RMTHIAVERN RRKQMNEHLS 120 VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQTLEAQ KLRVLQQVPA AANEETTNSK 180 LLSPPFAQFF MYPQYTCSQI PNKYTSKTMA STADIEVTLI ETHANLRILS RKGPRLLSKL 240 VAGFQSLYLF ILHLNVTTMD PLVLYSISAK VIFALFSPPP SSFFFKKNIP PPPHQYSWHN 300 NIITCMHVEP LNIVILLEML VFNYCHMGVA GRYYLFLSYT LSFPWKGKMS FSII

Sequence ? help Back to Top

Protein Sequence Length: 354 aa Download sequence

MALETLSSNE FLNFIIYDTI CATPYSSHDS FVTNFSLENS FSSQEQASSA LNCFSMVTPP  60
QCRSKGAEAV DRRPNLTVQG RNKRRRKPRV CKNKEEAETQ RMTHIAVERN RRKQMNEHLS  120
VLRSLMPESY VQRGDQASIV GGAIEFVKEL EHLLQTLEAQ KLRVLQQVPA AANEETTNSK  180
LLSPPFAQFF MYPQYTCSQI PNKYTSKTMA STADIEVTLI ETHANLRILS RKGPRLLSKL  240
VAGFQSLYLF ILHLNVTTMD PLVLYSISAK VIFALFSPPP SSFFFKKNIP PPPHQYSWHN  300
NIITCMHVEP LNIVILLEML VFNYCHMGVA GRYYLFLSYT LSFPWKGKMS FSII

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	101	112	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72210.1	1e-63	bHLH family protein