PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022731775.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 278aa MW: 29814.2 Da PI: 4.432 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.4 | 2.6e-05 | 252 | 275 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ C+ksF + L++H + H XP_022731775.1 252 FSCGSCNKSFGSEGGLESHKKAkH 275 89*****************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MEFWGIEVKA GQPIKTDPGA SYIIHLSQAS LGESKNKAES VPLYVNANGK KLVLGTLSHQ 60 NCPQLTFDLV FDQDFELSHN WKNGSVYFIG YRTFVPEEGT EDEFDTPSEE ESSEEEEVPV 120 AAAENGKTKI DTKTANADTG IKIAEPGNNK KTEDDDDESG SDEDDDSEDE DESDEMSMDE 180 GSDDEDEETP KKVESSKKRS AEATTPVSAK KAKSAATPQK TDGKKGGHAA TPHPSKQAGK 240 NSAKSPKSGG QFSCGSCNKS FGSEGGLESH KKAKHGGK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G44750.2 | 1e-37 | C2H2 family protein |