PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731764.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 237aa MW: 26987.1 Da PI: 6.8096

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32	2.9e-10	23	69	3	47
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 WT Ed+l+ +a +++ g +W++Ia +++ g++ ++k ++ ++ XP_022731764.1 23 QWTRLEDKLFEQALVEFPEGtsdRWEKIADRVP-GKSSAEVKQHYDML 69 7******************************.********9665 PP
2	Myb_DNA-binding	47.2	5.1e-15	122	166	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + +++G+g+W++I+r + +Rt+ q+ s+ qky XP_022731764.1 122 PWTEEEHKLFLIGLHKFGKGDWRSISRNVVVTRTPTQVASHAQKY 166 8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MYQDNNNSNS FLIQSSTRVL TTQWTRLEDK LFEQALVEFP EGTSDRWEKI ADRVPGKSSA 60 EVKQHYDMLL FDVYEIDAGR VEIPRYSDDL SVLPSSWDSD NQISFNSKSK LQGDNERKKG 120 TPWTEEEHKL FLIGLHKFGK GDWRSISRNV VVTRTPTQVA SHAQKYFLRQ SSVKKERKRS 180 SIHDITTVDS SMTDAPVEQT WVSLPVGPVQ QVPALQQLPP ASHLAAQGGY QNYGFPI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G04760.1	4e-81	MYB family protein