PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731195.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 882aa MW: 99349 Da PI: 6.313

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731195.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	48.6	2.6e-15	63	137	2	90
FAR1 2 fYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y+eYA+++GFs + + +++ k++g+i+ r+fvC +eg ++++ ++ C+a+l+++++ +kw vtk+ +eH+H+++ XP_022731195.1 63 YYDEYARRMGFSSKAGHISSQnKTDGTIVAREFVCGREGLKRRSADS--------------CNAMLRIELK-GDKWIVTKFIKEHSHSVM 137 8************9976665999***********9998877..............******.9************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 882 aa Download sequence
MDVHVIDSED CMSPHGMSDD GDAEPIEGGE ANHVENSLAH DEDGISEPYV GMEFDSEDAA 60 KTYYDEYARR MGFSSKAGHI SSQNKTDGTI VAREFVCGRE GLKRRSADSC NAMLRIELKG 120 DKWIVTKFIK EHSHSVMSPS KVHYLRPRRH FAGAAKTMAD GYQGVGIVPS GVMYVSMDGN 180 RVSMDANNRG VRNTPPVESN RSFKNVGALN YAVRPVNRKG TLGRDAQNLL DYFKKMQAEN 240 PGFFYAIQLD DDNRMANVFW ADARSRIAYM HFGDAVKLDT SYRVNQYRVP FAPFSGLNHH 300 GQTILFGCAL LLDDSEASFV WLFKTFLTAM NDCQPVSLIT DQDRVIQTAV SQVFPGVRHC 360 INKWHVLREG PEKLAHVCHV HPNFQVELYN CINLTETIEE FELSWSSLLE KYNLSAHDWL 420 QSLYSARAQW VPAYFRDSFF AVISPNQGFD GSFFDGYVNQ QTTIPMFFRQ YERAIENWFE 480 REIEADFDTT CTTPVLRTPS PMEKQAANLY TRKIFTKFQE ELVETFVYTA NRIEGDGAIS 540 TFRVAKFEDD NKEYIVTLNY PEMRANCSCQ MFEYSGILCK HVLTVFTVTN VLTLPSHYIL 600 KRWTQNAKSG VGTDERGGEL HGQLSLTARY NSLCQEAIKY AEDGAIATET YNVAMGALKE 660 GEKKVSVVKK NVSKVAPPSS QASSAAYDDK KSSMSASDTA PLLWPQQDEI TRRFNLNDTS 720 ALAQSVSDLN LPRMAPVSVH RDDGHPDNMP LLPCLKSMTW VMENKNSTPG NRVAVINLKL 780 QDYSKNSSAE TEVKFQLSRV TLEPMLRSMA YISEQLSTPA NRVAVINLKL QDAETTTGES 840 EVKFQVSRDT LGAMLRSMAY IREQLSNATE PQAEPLSKKH RK

Sequence ? help Back to Top

Protein Sequence Length: 882 aa Download sequence

MDVHVIDSED CMSPHGMSDD GDAEPIEGGE ANHVENSLAH DEDGISEPYV GMEFDSEDAA  60
KTYYDEYARR MGFSSKAGHI SSQNKTDGTI VAREFVCGRE GLKRRSADSC NAMLRIELKG  120
DKWIVTKFIK EHSHSVMSPS KVHYLRPRRH FAGAAKTMAD GYQGVGIVPS GVMYVSMDGN  180
RVSMDANNRG VRNTPPVESN RSFKNVGALN YAVRPVNRKG TLGRDAQNLL DYFKKMQAEN  240
PGFFYAIQLD DDNRMANVFW ADARSRIAYM HFGDAVKLDT SYRVNQYRVP FAPFSGLNHH  300
GQTILFGCAL LLDDSEASFV WLFKTFLTAM NDCQPVSLIT DQDRVIQTAV SQVFPGVRHC  360
INKWHVLREG PEKLAHVCHV HPNFQVELYN CINLTETIEE FELSWSSLLE KYNLSAHDWL  420
QSLYSARAQW VPAYFRDSFF AVISPNQGFD GSFFDGYVNQ QTTIPMFFRQ YERAIENWFE  480
REIEADFDTT CTTPVLRTPS PMEKQAANLY TRKIFTKFQE ELVETFVYTA NRIEGDGAIS  540
TFRVAKFEDD NKEYIVTLNY PEMRANCSCQ MFEYSGILCK HVLTVFTVTN VLTLPSHYIL  600
KRWTQNAKSG VGTDERGGEL HGQLSLTARY NSLCQEAIKY AEDGAIATET YNVAMGALKE  660
GEKKVSVVKK NVSKVAPPSS QASSAAYDDK KSSMSASDTA PLLWPQQDEI TRRFNLNDTS  720
ALAQSVSDLN LPRMAPVSVH RDDGHPDNMP LLPCLKSMTW VMENKNSTPG NRVAVINLKL  780
QDYSKNSSAE TEVKFQLSRV TLEPMLRSMA YISEQLSTPA NRVAVINLKL QDAETTTGES  840
EVKFQVSRDT LGAMLRSMAY IREQLSNATE PQAEPLSKKH RK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	0.0	FAR1 family protein