PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022731141.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 361aa    MW: 39951.6 Da    PI: 7.7578
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022731141.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.42.5e-08125145526
                     --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                      C++f++ G Ck Gd+C FaHg
  XP_022731141.1 125 ACPDFRK-GNCKKGDSCEFAHG 145
                     7******.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MMIGESTRPN PTVKIPVWDL FNDQTANFSS VNYNCNNAPN SPCPVDYLAS LHRYLPSNDF  60
ESDSLSEDSD LPVDAFSCDH FRMYEFKVRR CARGRSHDWT ECPYAHPGEK ARRRDPRKFH  120
YSGTACPDFR KGNCKKGDSC EFAHGVFECW LHPARYRTQP CKDGTSCRRR VCFFAHTPEQ  180
LRVLPQQSPR GNGSGSGDLD YTGSAMRHRL DFVSSPTSIL ASPSISPPSE SPPMSPVGTF  240
NSVSELAASM RNLQLSKAKM SGCSWGLQMG SGFGSPRGSA LRPSFCSSPS TPTRTPTRSS  300
VGQSDLWECN AFEEEPAMER VESGRDLRAR MYAKLSKENS VDGLDPTGSG PDVGWVAELV  360
K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G19810.11e-115C3H family protein