PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731119.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 300aa MW: 33727.6 Da PI: 7.8152

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731119.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00019	7	28	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++C+++F + L H+r+H XP_022731119.1 7 ICKICNRRFANGKALGGHMRSH 28 5********************9 PP
2	zf-C2H2	15	7.2e-05	176	198	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+ksF+++ L H +H XP_022731119.1 176 YKCQTCNKSFKSHQALGGHRASH 198 9***************9999888 PP
3	zf-C2H2	13.3	0.00024	227	249	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp C+k+F + L H+++H XP_022731119.1 227 FKCPFCDKMFQSGQALGGHQKVH 249 89******************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MEKRHTICKI CNRRFANGKA LGGHMRSHFA KHPIPPKLTL PFSFSNPPES NSSSALSCPS 60 SEINHSYRSV NHEVFSEVEF SRNPFGRRSK RFLNKAGSSS SIILSALPDE TLSDEDAAMC 120 LLMLSRDKRT SKQYKKELDY EYYGDDNDGE NLDEEEKNDE LFCVTNIKSH STHPKYKCQT 180 CNKSFKSHQA LGGHRASHKN KQVIRAKADE REVSAGGYHQ IHQKRIFKCP FCDKMFQSGQ 240 ALGGHQKVHF SNLPVAHSKT TSFTIQLVDL NLPASGEGDD DDDDEVRLVE NSTASNNGEM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	8e-34	C2H2 family protein