PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022731077.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 380aa MW: 42491.3 Da PI: 5.4947

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022731077.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.1	1.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l+ +++++G+g +W + ++++g++R++k+c++rw++yl XP_022731077.1 14 KGPWSPEEDAKLKAYIEKYGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 79*********************************************97 PP
2	Myb_DNA-binding	37.2	6.8e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_022731077.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR 120 RKQSNINRLS SSNQDPNVQF KGADDNQFSQ GLSNSALERL QLHMQLQGLQ NPFSFYDNPA 180 LWPKIHPLQE KMIQSIQTSN GSPNLLIQPL LPNPQPANEQ SVDDLYDQPA TASLTQDQQD 240 YPKNSKAKGL ELDNSLDGIS PSNESVPFGT GQNLKDSATV PNADGNIAQS INAAVQPVSN 300 FQFQTELDEF LNNKTASYAP QEYQMADQFD CFKEMNGSKD SLIWWSSDFD GKSASSNSWD 360 STSVLQSNGI FQDYELGYNM

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MGRAPCCDKA NVKKGPWSPE EDAKLKAYIE KYGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TKLKKKLLGR  120
RKQSNINRLS SSNQDPNVQF KGADDNQFSQ GLSNSALERL QLHMQLQGLQ NPFSFYDNPA  180
LWPKIHPLQE KMIQSIQTSN GSPNLLIQPL LPNPQPANEQ SVDDLYDQPA TASLTQDQQD  240
YPKNSKAKGL ELDNSLDGIS PSNESVPFGT GQNLKDSATV PNADGNIAQS INAAVQPVSN  300
FQFQTELDEF LNNKTASYAP QEYQMADQFD CFKEMNGSKD SLIWWSSDFD GKSASSNSWD  360
STSVLQSNGI FQDYELGYNM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	1e-102	MYB family protein