PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022730947.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 321aa MW: 34055.6 Da PI: 6.1057 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.6 | 0.00086 | 137 | 159 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++sF++ L H +H XP_022730947.1 137 YECKTCNRSFPSFQALGGHRTSH 159 99*********999998888777 PP | |||||||
2 | zf-C2H2 | 13.1 | 0.00028 | 215 | 237 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg F++ L H+r+H XP_022730947.1 215 HECSICGSEFTSGQALGGHMRRH 237 78********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MDTQAQEEFV GSNDHQALIM KGKRTKRQRS LSPFGVTVTS SSSSACDGDG DVGGGGGGGG 60 GGGVAEEYNS ISSPTTSGEI YESTEEEEDM ANCLIMLAQS DGPKRSSIEE KFKIEKFGAR 120 KFSEIATTTN KAGFYVYECK TCNRSFPSFQ ALGGHRTSHK KPKGAMAEDK KPVVLAVKDR 180 DVEEAQFNRE NPVLALQVSN NNKANCHGNK GNKIHECSIC GSEFTSGQAL GGHMRRHRAA 240 AAAAAAAAAA AAASNQTAMS VDTTSTTIDS SNGDDIKPRN ILSLDLNLPA PEDDLRDSKF 300 QFGTPQQAIV FSTPALVDCH Y |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28200.1 | 2e-61 | C2H2 family protein |