PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730947.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 321aa    MW: 34055.6 Da    PI: 6.1057
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00086137159123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C++sF++   L  H  +H
  XP_022730947.1 137 YECKTCNRSFPSFQALGGHRTSH 159
                     99*********999998888777 PP

2zf-C2H213.10.00028215237123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F++   L  H+r+H
  XP_022730947.1 215 HECSICGSEFTSGQALGGHMRRH 237
                     78********************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MDTQAQEEFV GSNDHQALIM KGKRTKRQRS LSPFGVTVTS SSSSACDGDG DVGGGGGGGG  60
GGGVAEEYNS ISSPTTSGEI YESTEEEEDM ANCLIMLAQS DGPKRSSIEE KFKIEKFGAR  120
KFSEIATTTN KAGFYVYECK TCNRSFPSFQ ALGGHRTSHK KPKGAMAEDK KPVVLAVKDR  180
DVEEAQFNRE NPVLALQVSN NNKANCHGNK GNKIHECSIC GSEFTSGQAL GGHMRRHRAA  240
AAAAAAAAAA AAASNQTAMS VDTTSTTIDS SNGDDIKPRN ILSLDLNLPA PEDDLRDSKF  300
QFGTPQQAIV FSTPALVDCH Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.12e-61C2H2 family protein