PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730846.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 363aa MW: 41150.4 Da PI: 7.6159

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730846.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	49.4	1.1e-15	52	111	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d ++n k+ ++++lg ++ +e Aa a++ a++k++g XP_022730846.1 52 SIYRGVTRHRWTGRYEAHLWDkNCWNEsqnKKgRQVYLGAYDDEEAAAHAYDLAALKYWG 111 57*****************999955656446***********************98 PP
2	AP2	51.2	3.1e-16	154	205	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g XP_022730846.1 154 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAATAYDMAAIEYRG 205 89**99******99966...3.6***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence
MAKLSQQNQK NNAQSNSIKN DISNTSTTSN GVTKVKRTRR SVPRDSPPQR SSIYRGVTRH 60 RWTGRYEAHL WDKNCWNESQ NKKGRQVYLG AYDDEEAAAH AYDLAALKYW GQDTILNFPL 120 STYEKELKEM EDQSREEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY 180 LYLGTYATQE EAATAYDMAA IEYRGLNAVT NFDLSRYIKW LKPNQTNTEI NPNPNSNIDT 240 ATSTVTPSPS QELNLSFFSN NNNQQLQAAS SFPSETLQTQ SRPVNATSAL GLLLQSSKFK 300 EMMEMTSAAD HCQLTPPVQR SFPEDIQTYF ECQDSSSYGD GDDIIFGELN SFMPPMFQGD 360 LDA

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence

MAKLSQQNQK NNAQSNSIKN DISNTSTTSN GVTKVKRTRR SVPRDSPPQR SSIYRGVTRH  60
RWTGRYEAHL WDKNCWNESQ NKKGRQVYLG AYDDEEAAAH AYDLAALKYW GQDTILNFPL  120
STYEKELKEM EDQSREEYIG SLRRKSSGFS RGVSKYRGVA RHHHNGRWEA RIGRVFGNKY  180
LYLGTYATQE EAATAYDMAA IEYRGLNAVT NFDLSRYIKW LKPNQTNTEI NPNPNSNIDT  240
ATSTVTPSPS QELNLSFFSN NNNQQLQAAS SFPSETLQTQ SRPVNATSAL GLLLQSSKFK  300
EMMEMTSAAD HCQLTPPVQR SFPEDIQTYF ECQDSSSYGD GDDIIFGELN SFMPPMFQGD  360
LDA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G16060.1	1e-106	AP2 family protein