PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730593.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 752aa MW: 86949.6 Da PI: 7.2541

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730593.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	83.4	3.8e-26	29	114	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+eYAk+vGF + k +s++s+ ++e+++++f+C ++g++++++++ ++r++ ++gCka+++vk+++dgkw+v+++ ++HnHel p XP_022730593.1 29 YYKEYAKSVGFGTAKLSSRRSRVSKEFIDAKFTCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRQDGKWYVYSFIKDHNHELLP 114 9*************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 752 aa Download sequence
MDSGISTVDT NVEPHLDLEF ESHEAAYSYY KEYAKSVGFG TAKLSSRRSR VSKEFIDAKF 60 TCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQDGKWY VYSFIKDHNH ELLPAQAHFF 120 RSHRNVDPFK NDVGRRRKNL AAVSKLFSAY KNVDFLEGYM RNKHDKGRRL ALEEGDAQVL 180 LELFMHMQEE NPKFFYAVDL NEEHQLRNVF WVDAKGMEDF SKFDDVVSFD STYFTNKYKI 240 PLVLFIGVNH HIQPTLFGCA LIADETVYTF LWLMQTWFIA MGERAPRVML TDQNNAIKAA 300 VASVFPSTRH CFCLWHVLEK LPRHLEYLSL WHDSLMLKLD KCIYRSWTEE QFEKRWWKMV 360 DKFHLREMQW IQSLYEDRKQ WVPAFMRDIS FAGLSTALRS DSLSSSFDKY VHGETSLRDF 420 IEQYRVILED KYEEEAKADF NAWHETPELK SPSPFEKQMS LVYTHEVFKK FQVEVLGAAA 480 CHLKKENEDH VSMTYSVKDF EDNQNYMVGC NESKSDIYCS CRSFEYKGYL CRHAIVVLQM 540 SGVFNIPSKY ILQRWTNAAL SRHPISQKLD EVQSKVRRYS DLCRRAIILS EEGSLSQESY 600 NLALSAIKEA LKQCVSINNL VENDVGPNTS VIHTDSGVEG LNQCVNAPEE KALDARMANT 660 IKTSQSVEAA LERQIDENSA TRKGKVFLAG AANDGSQDGF HQMELSGIRP TPVHNVMPSQ 720 MHNMVPTMLT NVASTHFHNV AATRLHDNRL HR

Sequence ? help Back to Top

Protein Sequence Length: 752 aa Download sequence

MDSGISTVDT NVEPHLDLEF ESHEAAYSYY KEYAKSVGFG TAKLSSRRSR VSKEFIDAKF  60
TCIRYGNKQQ SDDAINPRPS PKIGCKASMH VKRRQDGKWY VYSFIKDHNH ELLPAQAHFF  120
RSHRNVDPFK NDVGRRRKNL AAVSKLFSAY KNVDFLEGYM RNKHDKGRRL ALEEGDAQVL  180
LELFMHMQEE NPKFFYAVDL NEEHQLRNVF WVDAKGMEDF SKFDDVVSFD STYFTNKYKI  240
PLVLFIGVNH HIQPTLFGCA LIADETVYTF LWLMQTWFIA MGERAPRVML TDQNNAIKAA  300
VASVFPSTRH CFCLWHVLEK LPRHLEYLSL WHDSLMLKLD KCIYRSWTEE QFEKRWWKMV  360
DKFHLREMQW IQSLYEDRKQ WVPAFMRDIS FAGLSTALRS DSLSSSFDKY VHGETSLRDF  420
IEQYRVILED KYEEEAKADF NAWHETPELK SPSPFEKQMS LVYTHEVFKK FQVEVLGAAA  480
CHLKKENEDH VSMTYSVKDF EDNQNYMVGC NESKSDIYCS CRSFEYKGYL CRHAIVVLQM  540
SGVFNIPSKY ILQRWTNAAL SRHPISQKLD EVQSKVRRYS DLCRRAIILS EEGSLSQESY  600
NLALSAIKEA LKQCVSINNL VENDVGPNTS VIHTDSGVEG LNQCVNAPEE KALDARMANT  660
IKTSQSVEAA LERQIDENSA TRKGKVFLAG AANDGSQDGF HQMELSGIRP TPVHNVMPSQ  720
MHNMVPTMLT NVASTHFHNV AATRLHDNRL HR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	0.0	FAR1 family protein