PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730577.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family AP2
Protein Properties Length: 560aa    MW: 61093.9 Da    PI: 8.3015
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730577.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP247.93.3e-15184243155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_022730577.1 184 SIYRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEEKAARAYDLAALKYWG 243
                     57*******************666664477446*************************98 PP
2AP247.16e-15286337155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_022730577.1 286 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 337
                     57****************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 560 aa     Download sequence    
MDMNMGNMDS SSTRNWIAFS LSKHQQHLNL PSSSSHLCLY ETFTSSTTTT TAPTTTNSSA  60
AAAEEDAGAG TIAGATDSSM FNGGTKLEDF LGGSSTTTGV GGVPLPQLPR HHQFSTETPV  120
TISDNELYDS ELKTIAASFL RGFSSEQTDT HKQQQQQQLR QHQQMPKAEP SPRGAVDTFG  180
QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQSRKGRQVY LGGYDKEEKA ARAYDLAALK  240
YWGPTTTTNF PIFNYEKELE EMKNMTRQEF VASLRRKSSG FSRGASIYRG VTRHHQHGRW  300
QARIGRVAGN KDLYLGTFST QEEAAEAYDI AAIKFRGLNA VTNFDMSRYD VKSIANSNLP  360
IGGLSNKSRN CSDSASDSKS TDDDRDHSSA SSAVTFASQP AASSTLSFAI PIKQDPSDYW  420
SNIMGYNNTA VFLSNGKNPS VAPTNFFHQS SNNGSGFQSP SGFSMDFGGN SAVNGSINNG  480
FFSGGGCVQQ KQLQQQQQSG VISSTSSLPF ATPIVLNNSG NNNYEGSSGY GSWNIAQSLH  540
SYQTAKPRLS VFQTPIFGME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-142AP2 family protein