PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022730555.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 198aa MW: 21578.5 Da PI: 9.9162 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 106.5 | 4.1e-33 | 40 | 112 | 6 | 66 |
TCP 6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............s 66 ++++++h+kv+gRdRR+Rl+ caar+F+L++eLG+++d++ti WLl+qa+p+i+++tgt s XP_022730555.1 40 KTTKDRHAKVDGRDRRIRLPPVCAARIFQLTRELGHKTDGETIAWLLRQAEPSIIAATGTginlpsdttpalS 112 789*********************************************************7666654333330 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MASKNMGLEM PLSNPSTRKP RSFSQNKPST SKNKLVSSSK TTKDRHAKVD GRDRRIRLPP 60 VCAARIFQLT RELGHKTDGE TIAWLLRQAE PSIIAATGTG INLPSDTTPA LSTPTGLVPF 120 SSGSPLLSSD YSPSLNFSQA KVFSDNKDKL KNCVVSRAEP TLPPFEFDLV ANFELEFSAN 180 EIALLQSVTG CHDKEGKF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08330.1 | 1e-33 | TCP family protein |