PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730447.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 546aa MW: 59976.8 Da PI: 5.7436

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730447.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	35.8	1.4e-11	362	404	7	54
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L XP_022730447.1 362 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 404 79*******************66......**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MLSRVNGGVV WMDDKEDEDS ASWNRTTNNN NNNDNNSVIM ENKEEMGSLS TFKSMLEEEW 60 YVANNSISSH QNIRDLSFSP NLGDHQDNFL LHHHHHHPVD SSSSCSPSSS VFNNLDPSQV 120 QFFLQPKPTV SSLLNVVSNN PLDHGFDLSE IGFLDNQATN ASTLLNRGNA GVLGSFTDLS 180 HGNQMDTANL CPETQFSSSG MVQLPENGAG FAGFQGFDEN PGNALFLNRS KLLRPLESFP 240 SVGAQPTLFQ KRAALRKNLA DNGGNFGVLG GGKLNALSGI EGDKGKKEMA EENEKRKINN 300 RDDLEDVSID GSALNYDSDE FTDNNKVEEA IKNGGNTSNA NSTVTGGDQK GKKKGLPAKN 360 LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQRIND LHNELESNPP 420 SSSLTPTTSF HPLTPTPATL PSRIKDELCP SSLPSPNGQP ARVEVRQREG KAVNIHMFCG 480 RRPGLLLSTM RALDNLGLDI QQAVISCFNG FAMDIFRAEQ CKEGQDIHPE QIKAVLLDSA 540 GFHNMI

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MLSRVNGGVV WMDDKEDEDS ASWNRTTNNN NNNDNNSVIM ENKEEMGSLS TFKSMLEEEW  60
YVANNSISSH QNIRDLSFSP NLGDHQDNFL LHHHHHHPVD SSSSCSPSSS VFNNLDPSQV  120
QFFLQPKPTV SSLLNVVSNN PLDHGFDLSE IGFLDNQATN ASTLLNRGNA GVLGSFTDLS  180
HGNQMDTANL CPETQFSSSG MVQLPENGAG FAGFQGFDEN PGNALFLNRS KLLRPLESFP  240
SVGAQPTLFQ KRAALRKNLA DNGGNFGVLG GGKLNALSGI EGDKGKKEMA EENEKRKINN  300
RDDLEDVSID GSALNYDSDE FTDNNKVEEA IKNGGNTSNA NSTVTGGDQK GKKKGLPAKN  360
LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQRIND LHNELESNPP  420
SSSLTPTTSF HPLTPTPATL PSRIKDELCP SSLPSPNGQP ARVEVRQREG KAVNIHMFCG  480
RRPGLLLSTM RALDNLGLDI QQAVISCFNG FAMDIFRAEQ CKEGQDIHPE QIKAVLLDSA  540
GFHNMI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	352	370	KKKGLPAKNLMAERRRRKK
2	364	371	ERRRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26744.1	1e-125	bHLH family protein