PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730360.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C2H2
Protein Properties Length: 460aa    MW: 50826.1 Da    PI: 9.0103
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013828323
                    ETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  3 CpdCgksFsrksnLkrHirtH 23
                    C++C+k F r  nL+ H r H
  XP_022730360.1  8 CEICNKGFQRDQNLQLHRRGH 28
                    *******************88 PP

2zf-C2H2120.0006482104123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     +kC++C+k +  +s+ k H + +
  XP_022730360.1  82 WKCEKCSKKYAVQSDWKAHSKIC 104
                     58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence    Length: 460 aa     Download sequence    
MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK EVRKKVYICP EKTCVHHDPS  60
RALGDLTGIK KHFSRKHGEK KWKCEKCSKK YAVQSDWKAH SKICGTREYR CDCGTLFSRK  120
DSFITHRAFC DALAEESDRF TSVSTTMNPA TFRHDLINGA NNNAQPTGMH QFSSGFKPEF  180
AGSELVDNLN SNGQKPRLQL WLDPANSPLN PVGVPSDANA SLAPKSACLT DLGIAPMNMF  240
GSLLQTQWLS KYPEASFPVA NLNMSALPRG PKEEEENKED LSESITSLYS NNTRNNLQQS  300
HTHMSATALL QKAAQMGPTR SSPAFNNSGF GLMCSSATTI SSSNAYYQNK NEVYKNINEL  360
VSSLSSTQAA AIMKDGSTLD DLNSSSFVSN TTKNNADNLM MQGNGKQGGQ TVLSKLNSNS  420
NEVEASLTRD FLGVGVESSK PFLQQELAKF ASMGSVHPWS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13345KLKQRTNKEVRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G45260.11e-86C2H2 family protein