PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022730360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 460aa MW: 50826.1 Da PI: 9.0103 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14.2 | 0.00013 | 8 | 28 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_022730360.1 8 CEICNKGFQRDQNLQLHRRGH 28 *******************88 PP | |||||||
2 | zf-C2H2 | 12 | 0.00064 | 82 | 104 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + XP_022730360.1 82 WKCEKCSKKYAVQSDWKAHSKIC 104 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 460 aa Download sequence |
MATNRFLCEI CNKGFQRDQN LQLHRRGHNL PWKLKQRTNK EVRKKVYICP EKTCVHHDPS 60 RALGDLTGIK KHFSRKHGEK KWKCEKCSKK YAVQSDWKAH SKICGTREYR CDCGTLFSRK 120 DSFITHRAFC DALAEESDRF TSVSTTMNPA TFRHDLINGA NNNAQPTGMH QFSSGFKPEF 180 AGSELVDNLN SNGQKPRLQL WLDPANSPLN PVGVPSDANA SLAPKSACLT DLGIAPMNMF 240 GSLLQTQWLS KYPEASFPVA NLNMSALPRG PKEEEENKED LSESITSLYS NNTRNNLQQS 300 HTHMSATALL QKAAQMGPTR SSPAFNNSGF GLMCSSATTI SSSNAYYQNK NEVYKNINEL 360 VSSLSSTQAA AIMKDGSTLD DLNSSSFVSN TTKNNADNLM MQGNGKQGGQ TVLSKLNSNS 420 NEVEASLTRD FLGVGVESSK PFLQQELAKF ASMGSVHPWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 33 | 45 | KLKQRTNKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45260.1 | 1e-86 | C2H2 family protein |