PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022730359.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 513aa MW: 56342.4 Da PI: 9.0025 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 14 | 0.00015 | 61 | 81 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++C+k F r nL+ H r H XP_022730359.1 61 CEICNKGFQRDQNLQLHRRGH 81 *******************88 PP | |||||||
2 | zf-C2H2 | 11.8 | 0.00073 | 135 | 157 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + XP_022730359.1 135 WKCEKCSKKYAVQSDWKAHSKIC 157 58*****************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 513 aa Download sequence |
MMSQDGLSIP STIPGLAQEP NPNPTANPVK KKRNLPGTPD PDAEVIALSP KSLMATNRFL 60 CEICNKGFQR DQNLQLHRRG HNLPWKLKQR TNKEVRKKVY ICPEKTCVHH DPSRALGDLT 120 GIKKHFSRKH GEKKWKCEKC SKKYAVQSDW KAHSKICGTR EYRCDCGTLF SRKDSFITHR 180 AFCDALAEES DRFTSVSTTM NPATFRHDLI NGANNNAQPT GMHQFSSGFK PEFAGSELVD 240 NLNSNGQKPR LQLWLDPANS PLNPVGVPSD ANASLAPKSA CLTDLGIAPM NMFGSLLQTQ 300 WLSKYPEASF PVANLNMSAL PRGPKEEEEN KEDLSESITS LYSNNTRNNL QQSHTHMSAT 360 ALLQKAAQMG PTRSSPAFNN SGFGLMCSSA TTISSSNAYY QNKNEVYKNI NELVSSLSST 420 QAAAIMKDGS TLDDLNSSSF VSNTTKNNAD NLMMQGNGKQ GGQTVLSKLN SNSNEVEASL 480 TRDFLGVGVE SSKPFLQQEL AKFASMGSVH PWS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 86 | 98 | KLKQRTNKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G45260.1 | 1e-103 | C2H2 family protein |