PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730272.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 1037aa MW: 114121 Da PI: 4.8229

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730272.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.5	1.3e-17	39	85	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_022730272.1 39 KGQWTAEEDEILHEAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 85 799**************************9.**********986 PP
2	Myb_DNA-binding	65	1.4e-20	91	137	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEdel++++v+++G++ W+tIa++++ gR +kqc++rw+++l XP_022730272.1 91 KGPWSKEEDELIIELVNKFGPKKWSTIAQHLP-GRIGKQCRERWHNHL 137 79****************************.***********97 PP
3	Myb_DNA-binding	47.4	4.6e-15	143	185	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ XP_022730272.1 143 KEAWTQEEELALIRAHQIFGNR-WAELTKFLP-GRTDNAIKNHWN 185 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
MEGDRTVSTP SVGLSIGDGA PRMRALHGRT SGPTRRSTKG QWTAEEDEIL HEAVQRFKGK 60 NWKKIAECFK DRTDVQCLHR WQKVLNPELV KGPWSKEEDE LIIELVNKFG PKKWSTIAQH 120 LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELALIRAHQI FGNRWAELTK FLPGRTDNAI 180 KNHWNSSVKK KLNSYIASGL LDQFQFPLLT NQSQPMPSSS SRMQSNADDS GAKCRAEAED 240 ISECSQESTI VGCSQSTSDL ANASVHKIEQ FHLTEMPGVA KEKNSSSAPC SEEYYPSLED 300 INFSIPEIPC EAGYPMGGDY QFGLPDLPNI SPLELRQESS GLPTHCVDAN ESCEVMNVAF 360 QTSVGLNDPT SFVNLVTTSD KPEHMLITDD ECCRVLFSEA VKDRCLASEN FTQGSNMVEL 420 GGCTNTSICQ ASDIQISETG RTPPSQSNCP SRSEVLPTSC CQSFASPLLL SVEDGTLMYG 480 GEPGQLNGQP YGTQGQEFTM NMHDGFIYTN DDHTDLQEQL YLDKDSLKLV PVNTFGSESN 540 AIQTCPTVDD KPNLPAEQDV GGLCYEPPRF PSLDIPFFSC DLIPSGSDMQ QEYSPLGIRQ 600 LMMSSMNCIT PFKLWDSASS DNSPDAVLKS AAKTFTCTPS ILKKRHRDLL SPLSERRSDK 660 KLETDMTSNL TKDFSRLDVM FDEGGAAKTS QVSPSEHKTN SGVFIEEKEN LCQAFDMERA 720 NGGDHSESLD DEAQKKDSSG TNSQGNIKKE AYDIDTKEKS DADASDKIVQ RLSAVLVEHN 780 LNDLLLFSPD NVGPKADRQK LSSSVRTPRN QYHKSFGAIS NQGFASECLS GNACIVASSP 840 ALKVKNSEGH SIAVTTVQCS NSSATLENLV DNTGIDAVIE NYNIFGETPF KRSTESPLAW 900 KSPWFINSFV PGPRVDTEIT IEDIGYLMSP GDRSYDAIRL MKQLSEHTAA AYADALEVLG 960 NETPESIVKG RRSNNLKVDK ENNQLETQSH LASNIMAERR TLDFSDCGTP GKGTENGKSS 1020 TAVSLSSPSS YLLKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

MEGDRTVSTP SVGLSIGDGA PRMRALHGRT SGPTRRSTKG QWTAEEDEIL HEAVQRFKGK  60
NWKKIAECFK DRTDVQCLHR WQKVLNPELV KGPWSKEEDE LIIELVNKFG PKKWSTIAQH  120
LPGRIGKQCR ERWHNHLNPA INKEAWTQEE ELALIRAHQI FGNRWAELTK FLPGRTDNAI  180
KNHWNSSVKK KLNSYIASGL LDQFQFPLLT NQSQPMPSSS SRMQSNADDS GAKCRAEAED  240
ISECSQESTI VGCSQSTSDL ANASVHKIEQ FHLTEMPGVA KEKNSSSAPC SEEYYPSLED  300
INFSIPEIPC EAGYPMGGDY QFGLPDLPNI SPLELRQESS GLPTHCVDAN ESCEVMNVAF  360
QTSVGLNDPT SFVNLVTTSD KPEHMLITDD ECCRVLFSEA VKDRCLASEN FTQGSNMVEL  420
GGCTNTSICQ ASDIQISETG RTPPSQSNCP SRSEVLPTSC CQSFASPLLL SVEDGTLMYG  480
GEPGQLNGQP YGTQGQEFTM NMHDGFIYTN DDHTDLQEQL YLDKDSLKLV PVNTFGSESN  540
AIQTCPTVDD KPNLPAEQDV GGLCYEPPRF PSLDIPFFSC DLIPSGSDMQ QEYSPLGIRQ  600
LMMSSMNCIT PFKLWDSASS DNSPDAVLKS AAKTFTCTPS ILKKRHRDLL SPLSERRSDK  660
KLETDMTSNL TKDFSRLDVM FDEGGAAKTS QVSPSEHKTN SGVFIEEKEN LCQAFDMERA  720
NGGDHSESLD DEAQKKDSSG TNSQGNIKKE AYDIDTKEKS DADASDKIVQ RLSAVLVEHN  780
LNDLLLFSPD NVGPKADRQK LSSSVRTPRN QYHKSFGAIS NQGFASECLS GNACIVASSP  840
ALKVKNSEGH SIAVTTVQCS NSSATLENLV DNTGIDAVIE NYNIFGETPF KRSTESPLAW  900
KSPWFINSFV PGPRVDTEIT IEDIGYLMSP GDRSYDAIRL MKQLSEHTAA AYADALEVLG  960
NETPESIVKG RRSNNLKVDK ENNQLETQSH LASNIMAERR TLDFSDCGTP GKGTENGKSS  1020
TAVSLSSPSS YLLKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein