PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730267.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 790aa    MW: 88040.9 Da    PI: 7.1573
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730267.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS382.84e-1173957651373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL+ cA+a+ss+d   a++l++++++++sp gd  qRla+ f+ AL+ar+a++++++y +l +++ts    ++ l+a++++  ++P++k++ 
  XP_022730267.1 395 LRTLLILCAQAISSDDIVTAKELIKQIRQHSSPVGDGSQRLAHSFVDALEARMAGTGTQIYTSLGAKRTS---AADMLKAYQVYISTCPFVKMAI 486
                     5789************************************************************999998...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN+ Ile +e++ ++HiiDf+i +G+QWpaL++ La+Rp+gpp+lR+Tg++ p+ g   ++ ++etg+rLa+++e+ +vpfe+n+ +a+++e+
  XP_022730267.1 487 FFANNNILEVAEKAATLHIIDFGIFYGFQWPALIHRLANRPGGPPKLRLTGIEFPQRGfrPAKGVQETGHRLARYCERYNVPFEYNA-IAQKWET 580
                     *********************************************************9*9***************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     + + +L+++++E++aVn+ ++  +llde+v l+s+rd+vL+l+++++P+++v++  + +hn++ F++rf eal ++salfd+ e+ +pre++ r+
  XP_022730267.1 581 IGTVDLKINSNEVVAVNCLFRFRNLLDETVVLNSPRDTVLNLIRKINPDIFVHSIINGSHNAPFFVTRFREALFHFSALFDMCETVVPREDHMRS 675
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     ++E+++ grei+n vaceg+er+er e++++W+ r ++aGF+++pl+ + +k+++  +++ +   ++v+ + +++++gWk+r +++ SaW
  XP_022730267.1 676 MLEQKYYGREIMNTVACEGTERVERPESYKQWQVRNMRAGFTQLPLDPELMKKVRDRVKERYHSDFMVDVDGQWMLQGWKGRIIYASSAW 765
                     ***********************************************************999777************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 790 aa     Download sequence    
MGSQFNGFLN STNGFKFDNG FILPNSNGYS KFKISNGVGS NDQFLDFSSI GVPFLPSLGL  60
DNSSTSPSFL SMDKEGDSFS PSDDSDFSDT VLKYISQVLL EEDMEEKPCM FHDSLALQAA  120
EKSLYEVLGE SYPPRNQARP CSDRSVDSPD NCSFGASSDH STYTGSSSCT SNSIDSWWNG  180
DFGENNNKPS LLQTSIPENF VFQSTVNTGS QSSARFQNAS ANNGNGLVGS SMSKLSIPNY  240
FSQSELALQF KRGVEEASKF LPKGKQLTID FGSNGWTSEL KQKAPKMAVK VESDGKEYSP  300
PRLTGKKNHV REDEDIEEER NYKQSAVFGD EIELSDMFDK VLICSGRKGQ SSACNADKTL  360
QNGHSKTLQQ NEQTNGASSG KARGKKQGRK KVVDLRTLLI LCAQAISSDD IVTAKELIKQ  420
IRQHSSPVGD GSQRLAHSFV DALEARMAGT GTQIYTSLGA KRTSAADMLK AYQVYISTCP  480
FVKMAIFFAN NNILEVAEKA ATLHIIDFGI FYGFQWPALI HRLANRPGGP PKLRLTGIEF  540
PQRGFRPAKG VQETGHRLAR YCERYNVPFE YNAIAQKWET IGTVDLKINS NEVVAVNCLF  600
RFRNLLDETV VLNSPRDTVL NLIRKINPDI FVHSIINGSH NAPFFVTRFR EALFHFSALF  660
DMCETVVPRE DHMRSMLEQK YYGREIMNTV ACEGTERVER PESYKQWQVR NMRAGFTQLP  720
LDPELMKKVR DRVKERYHSD FMVDVDGQWM LQGWKGRIIY ASSAWIPASD SNYLNRSING  780
SLSSLGASLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein