PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730187.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 163aa MW: 17788.6 Da PI: 9.1786

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730187.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	39	61	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C+ C+k+Fs+ L H +H XP_022730187.1 39 FACKTCNKRFSSFQALGGHRASH 61 78**********99999998887 PP
2	zf-C2H2	11	0.0013	84	106	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++Cg+ F L H+r+H XP_022730187.1 84 HECSICGQEFAIGQALGGHMRRH 106 78*******************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 163 aa Download sequence
MKRGREVGEI EAMDMANCLM LLSKVGQTDP SKHYQGRVFA CKTCNKRFSS FQALGGHRAS 60 HKKPRLTGGD LPEIPDSPKK PKTHECSICG QEFAIGQALG GHMRRHRAAL NEGLVTRDLL 120 HEMKKSSGAE SGLCLDLSLT PWGADLELKP GKVAPTPVVH CFI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28710.1	2e-39	C2H2 family protein