PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729454.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

FAR1

Protein Properties

Length: 669aa MW: 77568.4 Da PI: 7.0981

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729454.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.5	2.3e-23	58	142	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn YAke GF +r+s+s +++ +e +++++ Cs g++++++ + ++r+etrtgC a++++++ + ++w++ +++leHnH+++ XP_022729454.1 58 DFYNMYAKEQGFGIRVSNSWFRSKRKERYRAKLSCSSAGFKKKSEAN-----NPRPETRTGCPAMVVIRLLDCKRWRIVEVQLEHNHQVS 142 6*******************999*************99888.....9********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MEEVCLNSEP VFDEIDEYEG EGDCSAVEHD ESGAKNSKKE PPPPTVGLEF DSFDEAYDFY 60 NMYAKEQGFG IRVSNSWFRS KRKERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVVI 120 RLLDCKRWRI VEVQLEHNHQ VSPQIKRFYK SHKKMILAAR KAQPPPEPVT EIHTIKLYRT 180 AAMDAGFNGF SNISEREGIH PADHSKHLEL KEGDAYAVYN YFCRMKLTNP NFFYLMDLDD 240 NGCLKNVFWA DARSRAAYGY FCDTIAIDTT CLANKYEIPL ISFVGVNHHG QSVLLGCGFL 300 GHESVEYFVW IFRAWLKCML GHSPQVIVTD QCKSLQIAVS EVFPKARHCF CMWYIMQRVP 360 EKLGGLKGFE AIKRQLNKAV YNSLKIVEFE TSWAEMIKQH GLGDNKWVQT LYEDRKQWVP 420 VYLKDTFFAG MIPIQENESL TAFFDGYVHK HTSFKEFVDK YDLALHRKHL KEATANMQSR 480 NSCFELKTRC NFEMQLSKVY TKEIFNKFQS EVEGMYSCFN TRQVSVNGPI ITYIVKERIE 540 IEGNEKDVRS YEVLFETSQV DIRCICSLFN YKGYLCRHAL NVLNYNGVEE IPSRYILPRW 600 CKDFKGRHVD QGGSTDIDVY NTVYWHNHLH KCAVPVVEEG AQSQEHYKIA LNELQELLNR 660 FNLVEDSLV

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MEEVCLNSEP VFDEIDEYEG EGDCSAVEHD ESGAKNSKKE PPPPTVGLEF DSFDEAYDFY  60
NMYAKEQGFG IRVSNSWFRS KRKERYRAKL SCSSAGFKKK SEANNPRPET RTGCPAMVVI  120
RLLDCKRWRI VEVQLEHNHQ VSPQIKRFYK SHKKMILAAR KAQPPPEPVT EIHTIKLYRT  180
AAMDAGFNGF SNISEREGIH PADHSKHLEL KEGDAYAVYN YFCRMKLTNP NFFYLMDLDD  240
NGCLKNVFWA DARSRAAYGY FCDTIAIDTT CLANKYEIPL ISFVGVNHHG QSVLLGCGFL  300
GHESVEYFVW IFRAWLKCML GHSPQVIVTD QCKSLQIAVS EVFPKARHCF CMWYIMQRVP  360
EKLGGLKGFE AIKRQLNKAV YNSLKIVEFE TSWAEMIKQH GLGDNKWVQT LYEDRKQWVP  420
VYLKDTFFAG MIPIQENESL TAFFDGYVHK HTSFKEFVDK YDLALHRKHL KEATANMQSR  480
NSCFELKTRC NFEMQLSKVY TKEIFNKFQS EVEGMYSCFN TRQVSVNGPI ITYIVKERIE  540
IEGNEKDVRS YEVLFETSQV DIRCICSLFN YKGYLCRHAL NVLNYNGVEE IPSRYILPRW  600
CKDFKGRHVD QGGSTDIDVY NTVYWHNHLH KCAVPVVEEG AQSQEHYKIA LNELQELLNR  660
FNLVEDSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	0.0	FAR1 family protein