PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729420.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 1662aa MW: 188474 Da PI: 9.2639

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729420.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00083	1546	1571	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 y+C C++sF +k +L+ H r+ + XP_022729420.1 1546 YQCDmeGCTMSFGSKQDLVLHKRNiC 1571 99********************9877 PP
2	zf-C2H2	11.3	0.001	1571	1593	3	23
ET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirtH 23 Cp Cgk F ++ +L++H r+H XP_022729420.1 1571 CPvkGCGKKFLSHKYLVQHRRVH 1593 9999*****************99 PP
3	zf-C2H2	12.4	0.00049	1629	1655	1	23
EEET..TTTEEESSHHHHHHHHHH..T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt..H 23 y+C+ Cg++F+ s++ rH r+ H XP_022729420.1 1629 YVCGeaGCGQTFRFVSDFSRHKRKtgH 1655 99********************99666 PP

Sequence ? help Back to Top
Protein Sequence Length: 1662 aa Download sequence
MAGSSLSPEP SQEVFSWLKS LPLAPEYRPT LAEFQDPIAY IFKIEKEASL YGICKIIPPV 60 PAAPKKTAIG NLNRSLLARA TANASSDLKL AAPTFTTRQQ QIGFCPRKPR PVQKPVWQSG 120 DYYTFQEFEE KAKRFERNYL KRYSKKVSLS ALEVETLFWK ATVDKPSSVE YANDMPGSAF 180 GPLNSKKSSG AGREAGEGVT VGETPWNMRA VSRAKGSLLR FMKEEIPGVT SPMVYFAMLF 240 SWFAWHAEDH DLHSLSYLHV GAGKTWYGVP RNAAVAFEEV VRVDGYGGEF NPLVTFSTLG 300 EKTTVMSPEV FVLAGIPCCR LVQNAGEFVV TFPRAYHSGF SHGFNFGEAA NIATPEWLRV 360 ARDAAIRRAS INYPPMISHF QLLYDLALEL CSRVPMSISA KPKSSRLKDK KKSEGETLVK 420 ELFVQNIRQN NDLLHILGKG SSVVLLPKSS SDISLCSDLR AASQLRINHR MSLDFCNYKE 480 VVKSSKDLAS DKIMLGGNEE IKGVKGFYSM KGKFAPMYEG NQNSSFSGTD YFCRLPLETL 540 NARMERETAV QGDALSDQRL FSCVTCGILC FACVAILQPT EQAARYLMSA DCSFLNDWTV 600 GSGVTRDGFT AAHGDAITSE QNPSTSWTNK GAPNALYDVP IQSVEYKFQM VDRSNQVMED 660 AVKGGDTSAL GLLASIYGNS SDSEEDHVEP NATISGDETN SAKVSPERKF PYNDFGFRPV 720 GTNESHNPSL SRLDSGEEAP VHVINCYSEP GSRRVDIKNR SPQTFDLAVE FETDSLASRR 780 SNGLEDKSRD PITASHANLS YSPATHGTEK MRFSNAIEPM ENADIPFAPR SDEDSSRMHV 840 FCLEHAVEVE KQLRKIGGVH VFLLCHPEYP KIEAEAKLVA EELGIDYPRN DILFGDATKD 900 DEQRIQSALD SEDAIPGNGD WAVKLGINLF YSANLSRSTL YSKQMPYNCV IYNAFGRNSP 960 ASLPTKWNVY GRRSGKQKKV VAGKWCGKVW MSNQVHPFLA QMDPEEQEQE RSFHAWATSN 1020 ENLERKPENV QKAEITQVAK MFKRKRKTRA EIAPSKKVIC IEQEGAVSDD SLDDSSLRQQ 1080 QRFFRGKQPS LIEKEEAISY DSLEDDSLLQ QRNLFRKKRT KFIEKEDAES EDAEDDFTHL 1140 QHSRNLRGRL GKYIEEDDAV SCDSLDESSL KRDRRIRGNW QAKFKESRDI VSDDEQDEIS 1200 HQVHRRIPRG RQMKSFERND ANSYDSRADN SLKQYRRIPK GKQAKFFERD DAMSDDASDY 1260 DSQSQLRRIP RAKQMKYMER DDAFSDDSLE DNPQQQQKRI PRSKVAKFTD REDVVSFDSL 1320 KSNSHRQHSR VPRSQLTKFI EREDAVSSDS PDDSFLQQLW RIRRSKQTKI LDKEDAVSDD 1380 SLDGTSLQQF RKTPRSRQRK FIEREDAISY DSLDGNYHQP NRSIRSRKKK AQTQRQIKQE 1440 TPRNVKQGKR RTTKQVVSQQ MKQETPRNWN TKIEQSARQC NSYGEEEIEG GPSSRLRKRV 1500 RKPLKESETK PIEKKQARKK KVKNASNVKT LAGHNTAKVR HKEAEYQCDM EGCTMSFGSK 1560 QDLVLHKRNI CPVKGCGKKF LSHKYLVQHR RVHMDDRPLK CPWKGCKMTF KWAWARTEHI 1620 RVHTGARPYV CGEAGCGQTF RFVSDFSRHK RKTGHSAKKG RR

Sequence ? help Back to Top

Protein Sequence Length: 1662 aa Download sequence

MAGSSLSPEP SQEVFSWLKS LPLAPEYRPT LAEFQDPIAY IFKIEKEASL YGICKIIPPV  60
PAAPKKTAIG NLNRSLLARA TANASSDLKL AAPTFTTRQQ QIGFCPRKPR PVQKPVWQSG  120
DYYTFQEFEE KAKRFERNYL KRYSKKVSLS ALEVETLFWK ATVDKPSSVE YANDMPGSAF  180
GPLNSKKSSG AGREAGEGVT VGETPWNMRA VSRAKGSLLR FMKEEIPGVT SPMVYFAMLF  240
SWFAWHAEDH DLHSLSYLHV GAGKTWYGVP RNAAVAFEEV VRVDGYGGEF NPLVTFSTLG  300
EKTTVMSPEV FVLAGIPCCR LVQNAGEFVV TFPRAYHSGF SHGFNFGEAA NIATPEWLRV  360
ARDAAIRRAS INYPPMISHF QLLYDLALEL CSRVPMSISA KPKSSRLKDK KKSEGETLVK  420
ELFVQNIRQN NDLLHILGKG SSVVLLPKSS SDISLCSDLR AASQLRINHR MSLDFCNYKE  480
VVKSSKDLAS DKIMLGGNEE IKGVKGFYSM KGKFAPMYEG NQNSSFSGTD YFCRLPLETL  540
NARMERETAV QGDALSDQRL FSCVTCGILC FACVAILQPT EQAARYLMSA DCSFLNDWTV  600
GSGVTRDGFT AAHGDAITSE QNPSTSWTNK GAPNALYDVP IQSVEYKFQM VDRSNQVMED  660
AVKGGDTSAL GLLASIYGNS SDSEEDHVEP NATISGDETN SAKVSPERKF PYNDFGFRPV  720
GTNESHNPSL SRLDSGEEAP VHVINCYSEP GSRRVDIKNR SPQTFDLAVE FETDSLASRR  780
SNGLEDKSRD PITASHANLS YSPATHGTEK MRFSNAIEPM ENADIPFAPR SDEDSSRMHV  840
FCLEHAVEVE KQLRKIGGVH VFLLCHPEYP KIEAEAKLVA EELGIDYPRN DILFGDATKD  900
DEQRIQSALD SEDAIPGNGD WAVKLGINLF YSANLSRSTL YSKQMPYNCV IYNAFGRNSP  960
ASLPTKWNVY GRRSGKQKKV VAGKWCGKVW MSNQVHPFLA QMDPEEQEQE RSFHAWATSN  1020
ENLERKPENV QKAEITQVAK MFKRKRKTRA EIAPSKKVIC IEQEGAVSDD SLDDSSLRQQ  1080
QRFFRGKQPS LIEKEEAISY DSLEDDSLLQ QRNLFRKKRT KFIEKEDAES EDAEDDFTHL  1140
QHSRNLRGRL GKYIEEDDAV SCDSLDESSL KRDRRIRGNW QAKFKESRDI VSDDEQDEIS  1200
HQVHRRIPRG RQMKSFERND ANSYDSRADN SLKQYRRIPK GKQAKFFERD DAMSDDASDY  1260
DSQSQLRRIP RAKQMKYMER DDAFSDDSLE DNPQQQQKRI PRSKVAKFTD REDVVSFDSL  1320
KSNSHRQHSR VPRSQLTKFI EREDAVSSDS PDDSFLQQLW RIRRSKQTKI LDKEDAVSDD  1380
SLDGTSLQQF RKTPRSRQRK FIEREDAISY DSLDGNYHQP NRSIRSRKKK AQTQRQIKQE  1440
TPRNVKQGKR RTTKQVVSQQ MKQETPRNWN TKIEQSARQC NSYGEEEIEG GPSSRLRKRV  1500
RKPLKESETK PIEKKQARKK KVKNASNVKT LAGHNTAKVR HKEAEYQCDM EGCTMSFGSK  1560
QDLVLHKRNI CPVKGCGKKF LSHKYLVQHR RVHMDDRPLK CPWKGCKMTF KWAWARTEHI  1620
RVHTGARPYV CGEAGCGQTF RFVSDFSRHK RKTGHSAKKG RR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	1495	1501	RLRKRVR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48430.1	0.0	C2H2 family protein