PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022729380.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | GATA | ||||||||
Protein Properties | Length: 329aa MW: 36127.2 Da PI: 4.807 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.8 | 2.3e-16 | 207 | 243 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+ XP_022729380.1 207 CQHCGVSEkyTPAMRRGPAGPRTLCNACGLMWANKGT 243 **********************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MAAVNPQPLQ ARPFEEYAGG TIQIEDDDGD YEDDAMDDVE DRNVKFLNVA EHGIGVLGGA 60 AGGGVFMASR TSELSLSFEG EVYVFPAVTP EKVQAVLLLL GGRDIPTGVP TVEVTFDQKN 120 RGVGDVPKRS NLSRRIESLV RFREKRKERC FDKKIRYTVR KEVAQRMNRK NGQFASLKES 180 TSTSNWDSSQ TGLQDSTRCA ETVVRRCQHC GVSEKYTPAM RRGPAGPRTL CNACGLMWAN 240 KGTLRDLSKG GRNIFLDQTE PETPNDVKPS IMEGDFSGNG DEHFMQGNPL QDVADGSNNA 300 SVNPDVEVGI YLHIEATDQD SGEQSSELK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21175.2 | 7e-72 | GATA family protein |